Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00300 ATGGATCCATTATCAGCAATTAGCGAAGAACTGGCGGAGATCGATGGACAGATCACTGACATTTTCCGCGCTTTATCAAATGGGTTTCAGAAATTGGAGAAGATTAAGGATTCACATAGGCAGAGCAGGCAGCTGGAAGAGCTCACAGATAAAATGCGAGAGTGTAAGCGGCTCATTAAAGAGTTTGATAAAGAAGTTAAGGCCTTGGAGGGTAGAAATGATAGAGAAACCAACAGAATGCTGAATGAGAAAAAACAGTCAATGATCAAAGAGTTGAATTCATATGTTGCTCTTAAAAAGCAATATGCTACAAATATTGAGAATAAGCGCATTGAGCTCTTTGAGGGGCCCAACGAAGGTTATGCAGAAGATAATGTCTTGCTAGCTTCATCTATGACAAATCAACAACTAATTGATAATGGCAATCGGATGATGGATGAGACAGATCAAGCCATTGAGAGGGGAAAGAAGGTTGTTCAAGAAACCATAAATGTCGGAACGGAGACTGGAGCTGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAATCGTCAATGAGCTGGATTCTATCCATTTCTCGTTAAAGAAAGCCTCTAAACTAGTCAAGGAACTCGGTAGGCAGATTGCTACTGACAAATGTATAATGGTATTACTTACCCTTATTGTGATTGGAGTAATAGCTATAATTATTGTAAAGCTGGTGCACCCAAACAACAAGGACATTCGTGATATACCTGGATTAGCCCCTCCAGTCATGAACCGAAAGCTGCTTTCAAGTTATAGTTGA 786 0.4046 MDPLSAISEELAEIDGQITDIFRALSNGFQKLEKIKDSHRQSRQLEELTDKMRECKRLIKEFDKEVKALEGRNDRETNRMLNEKKQSMIKELNSYVALKKQYATNIENKRIELFEGPNEGYAEDNVLLASSMTNQQLIDNGNRMMDETDQAIERGKKVVQETINVGTETGAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMVLLTLIVIGVIAIIIVKLVHPNNKDIRDIPGLAPPVMNRKLLSSYS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00300 261 Coils Coil 38 86 - -
Bach10g00300 261 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 17 231 - -
Bach10g00300 261 Pfam Sec20 151 228 IPR005606 GO:0005484|GO:0006890
Bach10g00300 261 SMART tSNARE_6 137 204 IPR000727 -
Bach10g00300 261 SUPERFAMILY SNARE fusion complex 132 205 - -
Bach10g00300 261 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Bach10g00300 261 Gene3D - 133 212 - -
Bach10g00300 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Bach10g00300 261 FunFam novel plant SNARE 11 133 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00300 Bach-Chr10 2078078 2081346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00300 K08494 - gmx:100786429 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00300 10 2078078 2081346 Bach10g00300 10 2078078 2081346 ECH