Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00233 ATGAGCACTGGGGAGCTCCTTAGCATCGAACCTCTCGAGCTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCATGTTCTCTTCAACTGTCTAATAAGACTGATAGCTATGTAGCTTTCAAGGTGAAAACAACCAATCCCAAAAAGTATTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGATCAACATGCGATGTTATAGTTACCATGCAAGCGCAGAAAGAGGCTCCACCTGACATGCAATGCAAGGATAAGTTTCTTCTTCAAAGTGTTAAGACAAACGATGGTACTGCCCCGAAGGATATCAACGCAGAAATGTTCAACAAGGAGGCAGGACATGTGGTTGAGGAGTGCAAGTTAAAAGTGGTGTATGTCGCTCCTCCTCAACCACCATCTCCAGTTGCAGAAGGTTCTGAAGAAGGGTCATCACCTAGAGGTTCTGTTTCAGAAAATGGCAATGCTGGTGGTGCTGACTTCACAACGGTAACAAGAGCATTCGCTGAACGAACTGAGGGTCAAGACAAATCTGCGGAGGCAAGAGCTCTTATCTCAAAGCTGACTGAGGAAAAGAATAATGCGATTCAACAAGCAAACAAGCTCCGCCAGGAACTGGAGCTGCTGAAGCGTGAAGGCAACAAAAGTCGTGGCGGAGTCTCCTTAATGTTTGTCGTCATAATTGGCTTACTTGGCATAATTATGGGATATCTCACGAAGAAGGCCTAA 726 0.4559 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTAPKDINAEMFNKEAGHVVEECKLKVVYVAPPQPPSPVAEGSEEGSSPRGSVSENGNAGGADFTTVTRAFAERTEGQDKSAEARALISKLTEEKNNAIQQANKLRQELELLKREGNKSRGGVSLMFVVIIGLLGIIMGYLTKKA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00233 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Bach10g00233 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Bach10g00233 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 237 IPR016763 GO:0005789
Bach10g00233 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Bach10g00233 241 Coils Coil 177 211 - -
Bach10g00233 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Bach10g00233 241 MobiDBLite consensus disorder prediction 130 158 - -
Bach10g00233 241 MobiDBLite consensus disorder prediction 143 158 - -
Bach10g00233 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Bach10g00233 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00233 Bach-Chr10 1648824 1652222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00233 - - gmx:100527687 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00266 4 1732924 1736094 Bach10g00233 10 1648824 1652222 BWGD
Bach10g00233 10 1648824 1652222 Bach4g00317 4 2048416 2051856 BWGD
Bach10g00233 10 1648824 1652222 Bach10g00233 10 1648824 1652222 ECH