Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04252 ATGTTTCAAAGAGAAATGACAATCGAATCCCATAATACCCTTGTCACAAAGCAATCTGAGATGAATGACTTTACAACAGAGGATCTTGAAGATGGGGGATTGTTATCTAAATTGGTTTATACATTCTTGTTTGGGCAGACTTTATCAGTGGTTTCTCCTGGTCTTTCATATGCAAGTGACTCAATGAAGATGAATCAGATATATGAAGTTGGAGAGTTATTTGATTTAAGCATCCAACTATTATACTTGGTATCATTATTGGGTTTGCTAGGGGTTGGGACTTACTTTGTGATTCGCCAAGTTCTTGTTCGCAGAGAACTTGACCTTTCTGCCAAAGAGTTGCAGGAGCAAGTACGAAGTGGTGATGCCAGTGCAACTGAGCTTTTTGAACTTGGTGCAGTGATGCTGCGGAGGAAGTTTTATCCAGCTGCCACCAAGTTTCTGCTTCAAGCAATTGAGAAATGGGATGGGGATAAGCAAGATCTTGCGCAGGTGTACAATGCTCTTGGTGTCAGCTACGTCCGTGATGGGAAGGTTGACAAAGGAATTGCTCAGTTTGAGATGGCTGTAAAGCTTCAACCAGGCTATGTCACAGCATGGAACAATCTTGGGGATGCCTTTGAGAACAAAAAAGAATATAAGGCTGCTCTTAAGGCATTTGAAGAAGTCCTGCTATTTGATCCTAACAACAAGATTGCTCGGCCCAGAAGAGACGCTTTGAAGGACCGCGTTGAAATGTACAAAGGGGTTCCTGTCAAGTCCAAAGAGAAATAA 774 0.4212 MFQREMTIESHNTLVTKQSEMNDFTTEDLEDGGLLSKLVYTFLFGQTLSVVSPGLSYASDSMKMNQIYEVGELFDLSIQLLYLVSLLGLLGVGTYFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWDGDKQDLAQVYNALGVSYVRDGKVDKGIAQFEMAVKLQPGYVTAWNNLGDAFENKKEYKAALKAFEEVLLFDPNNKIARPRRDALKDRVEMYKGVPVKSKEK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04252 257 Gene3D Tetratricopeptide repeat domain 104 250 IPR011990 GO:0005515
Arst9g04252 257 ProSiteProfiles TPR repeat region circular profile. 197 230 - -
Arst9g04252 257 SMART tpr_5 163 196 IPR019734 GO:0005515
Arst9g04252 257 SMART tpr_5 197 230 IPR019734 GO:0005515
Arst9g04252 257 ProSiteProfiles TPR repeat profile. 163 196 IPR019734 GO:0005515
Arst9g04252 257 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Arst9g04252 257 SUPERFAMILY TPR-like 122 234 IPR011990 GO:0005515
Arst9g04252 257 Pfam Tetratricopeptide repeat 168 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04252 Arst-Chr9 117504160 117507085 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04252 - - ahf:112712552 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g04252 9 117504160 117507085 Arst9g04252 9 117504160 117507085 ECH