Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04250 ATGGCTCACCTTCTCCACACTCCTTTCATTCCTTCTTCTTCCTCCTCCGCCGCCCTCCGCCGCAGCTCGGCCTCCTCGGGCACTCGTAGGCCTCCAGTGTCTCCCGGCGTGGTCCGCGCCAAGATCCGGGAGATCTTCATGCCGGCACTGAGCTCAACCATGACGGAGGGAAAGATCGTGTCCTGGGTNNNNNNNTCCGACAAGGCTGACATGGACGTAGAGACCTTCTACGATGGTTACCTCGCCGCCATCATGGTTGACGAGGGCGGTGTCGCCGCCGTCGGAGCTCCCATCGCCCTCCTCGCCGAAAACGAGGACGAGATCGAACAAGCAAAGTCCAAAGCACAGTCACCTTCATCGGCTTCTTCTTCTGCTTCGTCTTCTCCTGCACCTGCAGCTGCGCCAGCAGTGGAGGCTCAATCTGATAAGGCTCCCGTTAAGGCTGCTGCTGCTGCTGCTCCGGCGGTGGCATCCACGCATCCGGCGTCGGAGGGAGGGAAGAGAGTGGTGGCGTCTCCGTATGCGAAGAAGCTTGCGAAGGAGCTGAAGGTGGAGCTTGGGAGGATTGTGGGGACTGGACCTTTGGGCAGGATTGTAGCTAAGGATGTTGAGGCTTTTGCAGCTTCTGGTGCTGCTGCTGCTGCGGCTCCTGCTGCGGCCGCGGCACCGGCGGCTGCGAAGAGTGGTAGTGGGGTTGAATTGGGGAGTGTGGTGCCTTTTACGACAATGCAGAGTGCTGTGAGTAGGAACATGGTGGAGAGTTTGGGTGTTCCTACTTTTAGAGTTGGGTATACTATCACCACTGATGCACTCGATGCTCTCTACAAGAAGATCAAGTCAAAGGGAGTTACTATGACAGCATTGCTTGCCAAGGCTACAGCACTTGCTCTGGTTAAACACCCTGTTGTTAACTCTAGTTGTAGAGATGGTAATAGCTTTACGTATAATAGCAGCATCAACATCGCAGTTGCTGTTGCTACTGAAGGCGGACTGATTACTCCAGTGCTTCAGGATGCTGATAAGGTTGACGTCTATACATTGTCAAGAAAGTGGAAGGAGTTGGTTGATAAGGCCCGGGCCAAGCAGCTCCAACCTCATGAGTACAGCACAGGTACCTTCACTCTGTCCAACCTTGGAATGTTTGGTGTTGATCGCTTTGATGCTATTCTTCCACCTGGAACTGGAGCCATAATGGCTGTTGGATCATCACAGCCAACTGTTGTGGCTACCAAGGATGGTCGCATTGGCATGAAGAACCAAATGCAGGTCAATGTTACAGCAGATCATCGCGTGATATATGGTGCTGATCTGGCTCAATTCTTGCAAACCCTGTCACAAATTATTGAGGACCCCAAGGATCTTACTTTCTAG 1371 0.5332 MAHLLHTPFIPSSSSSAALRRSSASSGTRRPPVSPGVVRAKIREIFMPALSSTMTEGKIVSWVXXSDKADMDVETFYDGYLAAIMVDEGGVAAVGAPIALLAENEDEIEQAKSKAQSPSSASSSASSSPAPAAAPAVEAQSDKAPVKAAAAAAPAVASTHPASEGGKRVVASPYAKKLAKELKVELGRIVGTGPLGRIVAKDVEAFAASGAAAAAAPAAAAAPAAAKSGSGVELGSVVPFTTMQSAVSRNMVESLGVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVKHPVVNSSCRDGNSFTYNSSINIAVAVATEGGLITPVLQDADKVDVYTLSRKWKELVDKARAKQLQPHEYSTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGSSQPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLSQIIEDPKDLTF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04250 456 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 170 207 IPR004167 GO:0016746
Arst9g04250 456 Gene3D - 156 211 IPR036625 GO:0016746
Arst9g04250 456 Gene3D - 63 127 - -
Arst9g04250 456 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 162 208 IPR036625 GO:0016746
Arst9g04250 456 Pfam e3 binding domain 169 204 IPR004167 GO:0016746
Arst9g04250 456 Gene3D - 231 455 IPR023213 -
Arst9g04250 456 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 232 455 - -
Arst9g04250 456 MobiDBLite consensus disorder prediction 113 130 - -
Arst9g04250 456 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 38 455 IPR045257 GO:0006086|GO:0045254
Arst9g04250 456 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 237 454 IPR001078 GO:0016746
Arst9g04250 456 SUPERFAMILY CoA-dependent acyltransferases 237 454 - -
Arst9g04250 456 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 164 211 - -
Arst9g04250 456 MobiDBLite consensus disorder prediction 109 139 - -
Arst9g04250 456 CDD lipoyl_domain 44 101 - -
Arst9g04250 456 SUPERFAMILY Single hybrid motif 41 120 IPR011053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04250 Arst-Chr9 117500338 117503880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04250 1 456 Acyl Lipid Metabolism Gene Families AT1G34430 73.585 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04250 K00627 - gmx:100799926 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g04250 9 117500338 117503880 Arst9g04250 9 117500338 117503880 ECH