Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03948 ATGGCTTCCAACCTCAACCAACCAGGAGCTCAAGTTCAAAGGGAGAACAGCATCAACAGCGCTATCTCTGAGATATCGCCGTCTCCGTCTCCTTCGTCGGCGACGGCGCCGGCGCTGGTGTTATCAAACTCCGGGAAGCGAATCGACCAGGCGGGGAAGAAGAAGTATGTGAAGCAGGTGACTGGGCGGCACAACGACACGGAGCTTCACTTGGCGGCTCAAAAGGGTGATCTTGGTGCGGTGAAGCAGATCCTTTTGGACATCGATTCTCAGATTATTGGGACTCTTAGCGGCGATGAACTCAACGCTGAGATCGCTGAGGTGAGGGCCTCTGTTGTTAACGAAGAGAACGAGCTCGGAGAGACTCCTCTCTTCACTGCTGCTGAAAAGGGTCACCTTGATGTTGTCAAAGAGTTGTTGATGCATTCGAGTAAAGAAACTGTTTCCAAGAAGAATCGATCTGGCTTTGATCCCTTGCATATTGCTGCTAGTCAAGGCCACCATGCCATCGTCCAGGTTTTACTAGATTATGATCCCGGGTTAAGCAAAACAGTTGGTCCATCGAATGCTACTCCACTTATAACAGCAGCTACAAGAGGCCACACAGAAGTGGTGAAAGAATTGCTTTCAAAAGACTGTAGCTTGTTGGAAATTGCTAGGTCCAATGGAAAAAATGCCTTGCACTTAGCTGCCCGCCAGGGCCATGTAGAGATCGTAAAAGCGTTGCTCAGTAAAGATCCACAATTGGCACGGAGGACCGACAAGAAAGGACAGACGGCATTGCATATGGCTGTAAAAGGGCAAAGCTGTGATGTGGTAAAATTGCTTCTTGATGCAGATGCTGCCATCGTTATGCTTCCTGACAAGTTTGGCAACACCGCATTACATGTAGCTACCAGGAAAAAGCGAGTTGAGATAGTGAATGAGTTATTGCTTCTGCCAGACACCAATGTTAACGCATTAACCAGGGACCACAAAACAGCCCTTGACATTGCTGAAAATCTTCCCCTCTCTGAAGAGTCAACAGACATGAAGGACTGTTTATGTCGATATGGTGCGCTTAGAGCTAATGAGCTCAACCAACCAAGGGATGAACTGAGGAAAACTGTTACTCAAATTAAGAAAGATGTTCACACGCAACTTGAACAAACCAGAAAAACCAACAAGAATGTTCATAATATTTCCAAAGAGCTAAGGAAGCTCCATAGGGAAGGAATCAACAATGCCACAAACTCGGTGACTGTGGTGGCTGTATTGTTCGCTACAGTTGCTTTCGCCGCTATATTTACTGTGCCTGGTGGGGATGATGATAGTGGTCGGGCAGTGGTAGCAAGTTATGCTACTTTCAAAATCTTCTTCATCTTCAATGCTATTGCACTTTTTACATCTTTGGCTGTTGTGGTTGTCCAAATTACCTTGGTTAGAGGTGAGACTAAAGCAGAAAAAAGGGTGGTGGAGGTGATTAACAAGCTGATGTGGTTGGCTTCTGTATGTACTTCAGTGGCATTTATTGCCTCTTCGTACATTATCGTGGGTCGGAAGCACGAGTGGGCCGCAATCCTGGTTACAGTAGTTGGAGGAGTGATAATATCCGGAGTCCTTGGCACCATGACTTTCTATGTCGTGAGGTCGAAGAGAACCAGATCAATGAGGAAGAAGGAGAAGCAGCTAGCTAGGAGGAGCGGATCCAACTCTTGGCCTCATTCAGATTTCTCCAACTCCGAGGTTGACCGGATATATGCCCTTTGA 1749 0.4694 MASNLNQPGAQVQRENSINSAISEISPSPSPSSATAPALVLSNSGKRIDQAGKKKYVKQVTGRHNDTELHLAAQKGDLGAVKQILLDIDSQIIGTLSGDELNAEIAEVRASVVNEENELGETPLFTAAEKGHLDVVKELLMHSSKETVSKKNRSGFDPLHIAASQGHHAIVQVLLDYDPGLSKTVGPSNATPLITAATRGHTEVVKELLSKDCSLLEIARSNGKNALHLAARQGHVEIVKALLSKDPQLARRTDKKGQTALHMAVKGQSCDVVKLLLDADAAIVMLPDKFGNTALHVATRKKRVEIVNELLLLPDTNVNALTRDHKTALDIAENLPLSEESTDMKDCLCRYGALRANELNQPRDELRKTVTQIKKDVHTQLEQTRKTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDDDSGRAVVASYATFKIFFIFNAIALFTSLAVVVVQITLVRGETKAEKRVVEVINKLMWLASVCTSVAFIASSYIIVGRKHEWAAILVTVVGGVIISGVLGTMTFYVVRSKRTRSMRKKEKQLARRSGSNSWPHSDFSNSEVDRIYAL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03948 582 SMART ANK_2a 154 183 IPR002110 GO:0005515
Arst9g03948 582 SMART ANK_2a 290 320 IPR002110 GO:0005515
Arst9g03948 582 SMART ANK_2a 119 150 IPR002110 GO:0005515
Arst9g03948 582 SMART ANK_2a 256 285 IPR002110 GO:0005515
Arst9g03948 582 SMART ANK_2a 222 251 IPR002110 GO:0005515
Arst9g03948 582 SMART ANK_2a 64 93 IPR002110 GO:0005515
Arst9g03948 582 SMART ANK_2a 188 217 IPR002110 GO:0005515
Arst9g03948 582 Pfam Domain of unknown function 404 509 IPR026961 -
Arst9g03948 582 ProSiteProfiles Ankyrin repeat profile. 222 254 IPR002110 GO:0005515
Arst9g03948 582 ProSiteProfiles Ankyrin repeat region circular profile. 222 245 - -
Arst9g03948 582 SUPERFAMILY Ankyrin repeat 69 335 IPR036770 -
Arst9g03948 582 Pfam Ankyrin repeats (3 copies) 69 180 IPR002110 GO:0005515
Arst9g03948 582 Pfam Ankyrin repeats (3 copies) 188 247 IPR002110 GO:0005515
Arst9g03948 582 Pfam Ankyrin repeats (3 copies) 254 319 IPR002110 GO:0005515
Arst9g03948 582 ProSiteProfiles Ankyrin repeat region circular profile. 154 176 - -
Arst9g03948 582 FunFam Ankyrin repeat-containing protein ITN1 isoform A 181 380 - -
Arst9g03948 582 ProSiteProfiles Ankyrin repeat profile. 154 176 IPR002110 GO:0005515
Arst9g03948 582 FunFam Ankyrin repeat-containing protein ITN1 38 180 - -
Arst9g03948 582 ProSiteProfiles Ankyrin repeat region circular profile. 256 283 - -
Arst9g03948 582 MobiDBLite consensus disorder prediction 1 36 - -
Arst9g03948 582 Gene3D - 42 178 IPR036770 -
Arst9g03948 582 ProSiteProfiles Ankyrin repeat profile. 256 288 IPR002110 GO:0005515
Arst9g03948 582 ProSiteProfiles Ankyrin repeat profile. 119 151 IPR002110 GO:0005515
Arst9g03948 582 MobiDBLite consensus disorder prediction 551 571 - -
Arst9g03948 582 Coils Coil 98 118 - -
Arst9g03948 582 ProSiteProfiles Ankyrin repeat profile. 290 323 IPR002110 GO:0005515
Arst9g03948 582 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 36 568 - -
Arst9g03948 582 Gene3D - 179 393 IPR036770 -
Arst9g03948 582 ProSiteProfiles Ankyrin repeat region circular profile. 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03948 Arst-Chr9 115031007 115034200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03948 26 582 Miscellaneous Gene Families AT3G12360 82.616 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03948 - - gmx:100802596 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01793 6 19996229 19999588 Arst9g03948 9 115031007 115034200 ECH
Arst9g03948 9 115031007 115034200 Arst9g03948 9 115031007 115034200 ECH