Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03806 ATGGGAGTTCAACAACACAAAGTGCGTTCTAGAGGCAATGAGGCTGGTGGGAATGCTTGCACCAGCAGTTCATCCAATCACGGTGATGCTATGAATGCGTCCCCAGCATCGGCTGTTAGCAATCCAAGTGTAAATAGTAGTAATACTGATGGTGATGAAGTTAATGGACCTAGTGACATTTCTGCCAAGAAAAATATTACCCCACATATTTATAGGCAAGATGTTGTTAAAGATAAAACCAATGGAGCAATTGGGATTGTAACAGAAGTTGCTGGTGATTCAGATTCAGATTCAGATAGTAGCGTTACTGATGATGAGGATGATAGTGAGGATGAGGATGATGATCTTGAGGAAAGCAATGGTGATGCTAATAATAATAATGCTAGCAAAAATTCTGATAGGAATGGCACTGATGGGCACTCCAAAACTGGTGCCCTTCTAGCTGACCAGCTGCGTGCACTCTGGATGGATGAATCTGAACCTACTCGAAACTTCAGTGATGTAGAAGTAGTTGATCGTGGATTTTTACATGGGGATTTCGTTGCCGCTGCTTCAGACCCTACTGGTCAAGTCGGTGTAGTGGTAGATGTGAATACGTCTGTGGATTTGTTGGCCCCTGATGGATCTACAATAAAAGAGATCTCATCCAAAAACTTAAAACGTATTAGGGACTTTACCATTGGTGATTATGTTGTGCTTGGTCCTTGGCTAGGCAGAATCGATGATGTTTTAGATAATGTGACTGTCCTATTTGATGATGGTTCAGTGTGTAAAGTCACCAAAGCAGATCCTTTGAATCTTAAACCAATTTCTAAGAATATGGTTGAAGATGTGCATTTCCCCTATTACCCTGGGCAACGTGTAAGGGCTAGTTCATCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCTTGTGGAAAGCAAATCGGTTGGAAGGTACTGTCACTAAGGTTACAGTTGGGTCAGTGTTTGTTTATTGGATAGCATCTGCAGGTTATGGGGCGTATTCTTCTACTGCACCAGCTGAAGAGCAAAGTCCAAGGAACCTAAAATTGTTGTCCTGTTTTGCACATGCAAATTGGCAATTAGGTGACTGGTGTCTCTTGCCCTCATCAGCATATTCATCATCAATTTCCATGGAGAAAGGCATGTCAAAATTAGAACTTAATGATTCTGTTTACAATGAACTAGATTCTAATCCAACAGGAAGTGGATGTGATTCAGAAGATGCTGCTGTTGAGGAATCTAATGGGAATAAGGATGCTATGGACCTTGATCCAGTGAATTCTTTGGGAGGGAATGATGGAGCTGCTGTAAGTAACACATCTCGTGATAATAGCTCATGTGGTAGTTCCATCTCGGTATCTAAGGAACCGGTACATGAGACTTGGCCTCTTCATCGTAAGAAAATAAGGAAAGTTGTAATTAGGAAGGAAAAAAGGGCCCGAAAGAAAGAGGAAAGTTTTGAGAAAGCTCTTTTGATTGCCAACACAAGGACACGCGTTGATGTCGCATGGCAGGATGGCACCATAGAGCGTGGACTACATTCTACAAGCCTGATTCCTATAGATAATCCTGGTGATCATGAATTTGTTTCGGAACAATATGTGGTTGAGAAGACATCTGATGATGGTGAGGATACTTGTGAAGCTAGGCGTGTTGGGGTGGTTAGAAGTGTTAACGCGAAGGAGCGGACAGCTTGTGTGAGGTGGTTAAAACCAGTTGAACGTCCAGAAGATCCTAGAGTTTTTGACAAGGAGGAAATAGTAAGTGTATATGAGCTAGAGGGCCACCCAGATTATGATTACTGCTATGGAGATGTGGTTGTTCGGCTGTCACCTGTGTCTGTCTGGATAGAGACAGATTCTGTTGGAGAGTCCACTAAGAAATTGTCCCAGAAAAATGAGGAAGTTGGGATGAAAAAGGAAACAAAAAGCCCTACAGGTTCCAGTAGTAGTAAAGCAGAAAATGCATCTGGCGGGCAAACGTGTGCAGAGTTCTCTGACCTTTCTTGGGTTGGGAATATAACGGGTCTTAACAATGGTGATATTGAAGTTACATGGGCAGATGGGATGGTGTCAACGGTCGGACCCCAGGCAATCTATGTTGTTGGTCGAGATGATGATGATGAATCAATTGCTGCTGGAAGTGAACTAAGTGATGCTGCAAGCTGGGAAACTGTTAATGATGATGAAATGGAAGTCGATGAGGACTCCAAAGAGGATATCGAGAGGGAAAATTCAAGCAATGTTACTTCTGAGGCAGATGAGACTGGAGAGAACGATTCTGGAACGGCTGCAGCACTTTCTTCTGTACCCCTAGCCGCCTTACGATTTTTCACCAGATTTGCCTCAGGGATATTCTCAATGGGCCAAAGAAACTTAGATTCTGCTGACTCGCAGTCCAAAAGTGAAAGTGAACTTAGTGACGAGTCTTGTTCTCAGCAATGTCTCAACAAAGATGGGGACAATTTAAGCAATAAAAATGAAATAAATGAAGAAGCTGCTGCTCAAGAAGCAGCTGAAATATTGAAAACACTTGGGACAGAGTGTAGCCTTAGCACTGAAGATGCTCCAGCAACTTGCGACAATGATATTTGTAGTTTCAAACACTTTGACATAGCGACAGACCCTTCAGACAATTACTTTATTGGTGCAAATGGACAGAGTAATAACCGAAAATGGTTTAAGAAGGTGCAACAAGATTGGAGCATACTGCAGAATAACCTTCCAGAGGAAATCTATGTCCGAGTTTATGAGGATAGAATGGATCTTTTGAGAGCAGTTATTGTAGGGCCATACGGGACCCCATACCAAGATGGTCTCTTTTTCTTTGATTTTCACCTTCCACCAGAGTACCCTGATGTGCCACCATCAGCATATTATCATTCTGGTGGTTGGCGTATTAACCCTAATTTGTACGAGGAAGGGAAGGTGTGCCTGAGCCTTCTAAATACATGGACGGGCAGAGGAAATGAAGTATGGGATCCAAAATCTTCCAGTATCCTTCAAGTCCTAGTTTCACTACAAGGTTTGGTGCTCAACTCTAAGCCTTACTTCAACGAAGCTGGGTATGACAAACAGATTGGAACAGCAGAAGGAGAGAAGAATTCACTGTCATACAATGAGAATACGTTTTTACTCAACTGCAAGACTATGATGTATCTTATGCGTAAACCCCCCAAGGACTTTGACATGCTCATCAAAGAACATTTTAGGCAGCGCGGTCATAACATCCTCAAGGCTTGTGATGCATATATGAAGGGTTACTTGATTGGCACATTGACCAAAGATGCTTCTGTGAGTGACAAGAGTGAACAGAATTCAACTTCTGTGGGTTTCAAGTTGATGTTAGCCAAGATAGTGCCAAAGCTTTTCTCGTCATTGAGCAATGTTGGCGCGGATTGCGAAGAATTCAAGCATCTGAAAGAGTTGTAG 3438 0.4258 MGVQQHKVRSRGNEAGGNACTSSSSNHGDAMNASPASAVSNPSVNSSNTDGDEVNGPSDISAKKNITPHIYRQDVVKDKTNGAIGIVTEVAGDSDSDSDSSVTDDEDDSEDEDDDLEESNGDANNNNASKNSDRNGTDGHSKTGALLADQLRALWMDESEPTRNFSDVEVVDRGFLHGDFVAAASDPTGQVGVVVDVNTSVDLLAPDGSTIKEISSKNLKRIRDFTIGDYVVLGPWLGRIDDVLDNVTVLFDDGSVCKVTKADPLNLKPISKNMVEDVHFPYYPGQRVRASSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGAYSSTAPAEEQSPRNLKLLSCFAHANWQLGDWCLLPSSAYSSSISMEKGMSKLELNDSVYNELDSNPTGSGCDSEDAAVEESNGNKDAMDLDPVNSLGGNDGAAVSNTSRDNSSCGSSISVSKEPVHETWPLHRKKIRKVVIRKEKRARKKEESFEKALLIANTRTRVDVAWQDGTIERGLHSTSLIPIDNPGDHEFVSEQYVVEKTSDDGEDTCEARRVGVVRSVNAKERTACVRWLKPVERPEDPRVFDKEEIVSVYELEGHPDYDYCYGDVVVRLSPVSVWIETDSVGESTKKLSQKNEEVGMKKETKSPTGSSSSKAENASGGQTCAEFSDLSWVGNITGLNNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIAAGSELSDAASWETVNDDEMEVDEDSKEDIERENSSNVTSEADETGENDSGTAAALSSVPLAALRFFTRFASGIFSMGQRNLDSADSQSKSESELSDESCSQQCLNKDGDNLSNKNEINEEAAAQEAAEILKTLGTECSLSTEDAPATCDNDICSFKHFDIATDPSDNYFIGANGQSNNRKWFKKVQQDWSILQNNLPEEIYVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQIGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFDMLIKEHFRQRGHNILKACDAYMKGYLIGTLTKDASVSDKSEQNSTSVGFKLMLAKIVPKLFSSLSNVGADCEEFKHLKEL 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03806 1145 Gene3D Ubiquitin Conjugating Enzyme 863 1131 IPR016135 -
Arst9g03806 1145 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 894 1054 IPR000608 -
Arst9g03806 1145 FunFam Probable ubiquitin-conjugating enzyme E2 23 860 1133 - -
Arst9g03806 1145 SUPERFAMILY UBC-like 878 1061 IPR016135 -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 626 661 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 98 120 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 627 643 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 728 765 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 1 142 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 644 661 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 434 454 - -
Arst9g03806 1145 SMART ubc_7 897 1054 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 398 454 - -
Arst9g03806 1145 CDD UBCc 897 1047 IPR000608 -
Arst9g03806 1145 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 89 1136 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 794 826 - -
Arst9g03806 1145 MobiDBLite consensus disorder prediction 15 55 - -
Arst9g03806 1145 Pfam Ubiquitin-conjugating enzyme 899 1043 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03806 Arst-Chr9 114082181 114088799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03806 172 374 Miscellaneous Gene Families AT2G33770 40.686 3.52e-49 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03806 K10581 - gmx:100809513 1714.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03806 9 114082181 114088799 Arst9g03806 9 114082181 114088799 ECH