Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03535 ATGCAAAGCATCATTTATCTTTGCGTAACAATCATCTTGTGCATTCACACAAACAATAAGTGTGGTTTCCTCGTACAAGGTCTCACCTCATCCTCAGATATTGAAGCACTAAAGGCTTTCAAGGCCTCAATCAAACCCTCCTCAATAACACCATGGTCATGCATAGCATCCTGGAACTTCACCACTGACCCATGCTCCGTCCCTCGCCGCACCCACTTCACGTGCGGCCTCACCTGCACCGCCGACAACACCCGCATCAACCAAATCACCCTCGACCCCGCTGGCTACACAGGAACACTCACCCCACTCGTCTCTCAACTCACCTCACTCATCACTCTCGACCTCTCCGATAACTCTTTCTATGGCACAATCCCTTCTTCTCTCTCTTCCCTCTCAAAACTCCAAACTTTATCCCTCCGATCCAACTCTTTCTCAGGTTCAATCCCTCCCTCCATAACCACCCTCAAATCGCTCCAATCGCTTGATCTTTCACAGAATTCTCTTTCTGGGTTCCTTCCAAAGTCCATGAACTCTCTCACTAGTCTCCGAAGAATGGACCTCAGCTTCAACAAGCTTACCGGTGGACTCCCCAAGTTACCACCCAACTTGCTGGATTTGGCGATCAAGGCAAACTCTCTATCTGGGGTTCTTCAAAAAACAACCTTTGAAGGTTTGAACCAGTTGGAAGTGGTGGAACTCAGTGATAACGCACTTCAGGGGATCATCGAAACGTGGCTCTTCCTTTTGCCTTCCCTGCAGCAACTGGATTTGGCCAACAACTCCTTCAGTGGTGTGGAGATCTCGAGGCCGGTTGTTGGCGGTGGCGGGAACAGCCTCGTGGCGGTGAATCTTGGATTCAACAAGATCCAAGGCTACGCCCCCGCGAATCTCGGCGCGTATCCGTCGCTGTCATTTTTGTCGCTCCGTTACAACGCGCTACGTGGCGCGATACCATTGGAGTACGGGAAAAGCAAGTCCATGAAGAGGTTGTTCCTGGACGGGAACTTCCTAATGGGGAAGCCACCGGCGGGACTGGTGGCTGCCGGAGCTGAAGTTTCCGGCAGCTTGGGTGACAACTGCCTTGAGGGGTGTCCAGCGATGTCGCAGCTGTGCACGCCGAAACAGAAACCGAGCTCTGTTTGCAAGCAAGTCTACCGTGGAAGACCTACGAGATAG 1176 0.5196 MQSIIYLCVTIILCIHTNNKCGFLVQGLTSSSDIEALKAFKASIKPSSITPWSCIASWNFTTDPCSVPRRTHFTCGLTCTADNTRINQITLDPAGYTGTLTPLVSQLTSLITLDLSDNSFYGTIPSSLSSLSKLQTLSLRSNSFSGSIPPSITTLKSLQSLDLSQNSLSGFLPKSMNSLTSLRRMDLSFNKLTGGLPKLPPNLLDLAIKANSLSGVLQKTTFEGLNQLEVVELSDNALQGIIETWLFLLPSLQQLDLANNSFSGVEISRPVVGGGGNSLVAVNLGFNKIQGYAPANLGAYPSLSFLSLRYNALRGAIPLEYGKSKSMKRLFLDGNFLMGKPPAGLVAAGAEVSGSLGDNCLEGCPAMSQLCTPKQKPSSVCKQVYRGRPTR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03535 391 PRINTS Leucine-rich repeat signature 179 192 - -
Arst9g03535 391 PRINTS Leucine-rich repeat signature 158 171 - -
Arst9g03535 391 Gene3D Ribonuclease Inhibitor 198 371 IPR032675 -
Arst9g03535 391 Pfam Leucine rich repeat 152 192 IPR001611 GO:0005515
Arst9g03535 391 Pfam Leucine rich repeat 201 261 IPR001611 GO:0005515
Arst9g03535 391 SUPERFAMILY L domain-like 74 342 - -
Arst9g03535 391 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Arst9g03535 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 383 - -
Arst9g03535 391 SMART LRR_typ_2 179 206 IPR003591 -
Arst9g03535 391 SMART LRR_typ_2 155 178 IPR003591 -
Arst9g03535 391 SMART LRR_typ_2 225 248 IPR003591 -
Arst9g03535 391 SMART LRR_typ_2 107 131 IPR003591 -
Arst9g03535 391 SMART LRR_typ_2 249 270 IPR003591 -
Arst9g03535 391 FunFam Nuclear pore complex protein NUP107 30 198 - -
Arst9g03535 391 Pfam Leucine Rich Repeat 109 131 IPR001611 GO:0005515
Arst9g03535 391 Gene3D Ribonuclease Inhibitor 30 197 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03535 Arst-Chr9 111868611 111870244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03535 104 363 Receptor kinase-like Gene Family AT5G20480 32.955 1.33e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03535 - - gmx:100801713 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03535 9 111868611 111870244 Arst9g03535 9 111868611 111870244 ECH