Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03410 ATGCAAATGTTGCAAACCCTAGCACCCGTAAGGGCAGCAAAACCCTGTTTCATGGTGAATACATCATTGGCATGGCTACGAAACTTGAAAGGGAGAGCGAGAGTGCGTGCATTCTCTTTCTCCTCCTCCTCCTCCGACGATTACGGAGACCAATCACGCGGTGGCCTCCCCCGCTTCTACTCCGAAACTTTTCCTTCTTCCAAGGGTAGTGTTGTGCGTGTAAAAGGTGATGAATTTTGGCATATGACAAAAGTATTGAGGCTGGGTGCCGATGACAGGGTAGAGCTCTTCAACGGGAAGGGAGGTCTGGTAGAAGGATGCATACAGAACATTGATCGTACTGGACTTGATTTTGTTGCACTGAATGATCCAAAGCTAATACATCCACAGAACATGCAGTTGCATGTATTTGCTGGTTTTGGAACTTTGAAGGGTGGACGTGCTGACTGGCTTGTAGAGAAGTGCACAGAACTTGGAGCCAATAGTGTAACTCCACTACTTACTGAACGTTCTCCATCAATCTCAGAAAATCGGGTAGACAGATTGGAACGGGTAATCTTAGCGGCATCAAAACAATGTCAACGGCTGCATGAAATGGTCCTGAAACCTCCTGTAAAGGTTAATGACCTTCTCCATCTTATTGCACAGTCAAAGCTTTCTCTTGTTGCAACAGCAAAGGCATCTCCTGTTCTTAATGCGTTGACAGAATTCGAAAAGGAAACTAGTGGCTTAATCGTAATTGGACCTGAAGGCGACTTCACCGAGAAAGAAGAGAGTATGATGATGGAAGCGGGTGCCATAGGTGTTAGTCTCGGGCCACATCGTCTAAGGGTTGAAACTGCCACAATAGCACTTCTATCAACTCTCATGTTATGGTCTGACTCTCACCGAAGCTAA 897 0.4615 MQMLQTLAPVRAAKPCFMVNTSLAWLRNLKGRARVRAFSFSSSSSDDYGDQSRGGLPRFYSETFPSSKGSVVRVKGDEFWHMTKVLRLGADDRVELFNGKGGLVEGCIQNIDRTGLDFVALNDPKLIHPQNMQLHVFAGFGTLKGGRADWLVEKCTELGANSVTPLLTERSPSISENRVDRLERVILAASKQCQRLHEMVLKPPVKVNDLLHLIAQSKLSLVATAKASPVLNALTEFEKETSGLIVIGPEGDFTEKEESMMMEAGAIGVSLGPHRLRVETATIALLSTLMLWSDSHRS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03410 298 Pfam RNA methyltransferase domain 133 289 IPR046886 -
Arst9g03410 298 SUPERFAMILY alpha/beta knot 132 293 IPR029028 -
Arst9g03410 298 Pfam RNA methyltransferase PUA domain 75 119 IPR046887 -
Arst9g03410 298 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 55 297 IPR006700 GO:0006364|GO:0008168
Arst9g03410 298 SUPERFAMILY PUA domain-like 59 118 IPR015947 -
Arst9g03410 298 NCBIfam RsmE family RNA methyltransferase 70 290 IPR006700 GO:0006364|GO:0008168
Arst9g03410 298 Gene3D - 55 297 IPR029026 -
Arst9g03410 298 CDD RsmE-like 134 287 IPR046886 -
Arst9g03410 298 FunFam uncharacterized protein LOC106771328 isoform X2 55 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03410 Arst-Chr9 111241566 111244133 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03410 K09761 - gmx:100777253 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03410 9 111241566 111244133 Arst9g03410 9 111241566 111244133 ECH