Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03395 ATGAATAACTTTCACATAGCACTCTTCTTCCTCATTGGGATTGTGTCCTCCATTTTGTTTCAGATTTCAGTTGCATCTGTTGTTTCAACAGGAAACTTCAATAAGGACTTCTATGTTTTATGGTCACCTACCCATGTAAACACATCTGCTGATGGACACACTAGAACTTTGAAGCTTGATCAACAATCCGGGGCTGGTTTTGCTTCAAATCAGATGTTTTTGTTTGGACAAATTGACATGCAAATCAAACTAGTACCAGGTGATTCTGCAGGCACAGTATTAGCCTACTATATGGCATCTGATCAACCAAATCGCGACGAGATTGACTTTGAGTTTCTAGGAAACATGTCTGAGCAGCCTTATATTCTTCAAACAAATATTTATGCAGATGGGTTTGGCAATAGAGAGGAGAGGATTTATCTATGGTTTGATCCTACAGAGGACTTCCATGCTTACTCAGTGTTGTGGAATCTGCACCAGATTGTGTTCATGGTGGATAGCATTCCAATAAGAGTGTACAGAAACCATGGTGACAAGGGAGTTCCATTTCCAAGAAGGCAACCAATGAGTCTAGAAGCAACTCTTTGGAATGGTGATAGCTGGGCAACAAGAGGAGGTCAAGACAAGATAGATTGGACAAAGGGTCCCTTCATAGCTTCATTCAGGAACTACAACATTGATGCTTGTGTGTGGAAAGGGAACCCAAGGTTCTGCAGAGTAGCTAGCCATGTTAATTGGTGGAACCTAAACAACTTCAGCACACTCACATCTCCACAAAGAAGGTGGTTCAAATGGGTCAGGAAATACCATATGATTTATGATTATTGCCAAGACAATGAGAGGTTCCAAAACAATCTTCCACAGGAATGTTCCCTTCCCAAGTATTGA 888 0.411 MNNFHIALFFLIGIVSSILFQISVASVVSTGNFNKDFYVLWSPTHVNTSADGHTRTLKLDQQSGAGFASNQMFLFGQIDMQIKLVPGDSAGTVLAYYMASDQPNRDEIDFEFLGNMSEQPYILQTNIYADGFGNREERIYLWFDPTEDFHAYSVLWNLHQIVFMVDSIPIRVYRNHGDKGVPFPRRQPMSLEATLWNGDSWATRGGQDKIDWTKGPFIASFRNYNIDACVWKGNPRFCRVASHVNWWNLNNFSTLTSPQRRWFKWVRKYHMIYDYCQDNERFQNNLPQECSLPKY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03395 295 Pfam Glycosyl hydrolases family 16 34 214 IPR000757 GO:0004553|GO:0005975
Arst9g03395 295 ProSitePatterns Glycosyl hydrolases family 16 active sites. 107 117 IPR008263 GO:0004553|GO:0005975
Arst9g03395 295 CDD GH16_XET 29 290 IPR016455 GO:0010411|GO:0016762|GO:0042546
Arst9g03395 295 PIRSF EndGlu_transf 1 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Arst9g03395 295 FunFam Xyloglucan endotransglucosylase/hydrolase 20 292 - -
Arst9g03395 295 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 221 IPR000757 GO:0004553|GO:0005975
Arst9g03395 295 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 244 290 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Arst9g03395 295 Gene3D - 19 294 - -
Arst9g03395 295 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 293 IPR013320 -
Arst9g03395 295 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 30 290 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03395 Arst-Chr9 111121363 111122654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03395 69 295 Glycoside Hydrolase AT2G14620 73.568 9.09e-133 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03395 K08235 - gmx:100783152 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03395 9 111121363 111122654 Arst9g03395 9 111121363 111122654 ECH