Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03133 ATGGTTAAGATAACTATAGTTGGAAGGGCAAGGGATGGGTTACCCCTAGCACAAAGAGTGAGATATATGAATGAAGAGAATTGCTATGTTTCATGTTACAGGCAACAAGCTGAATTTATTCTCCAAGAAATTTCAAGAGGGGCTTTCATGGCTTCCAAGTTCACAATTCCAGTAGATCATTGCTCCTTCAATTGCTTGGTGGAGAATGGAGTTGTTTTCATTGTGTTATGTGACTCTTCATACCCAAGAAAACTGGCTTTCCATTACCTACAAGATCTACAAAAGGAGTTTGACAAGTTTAATAAAACTCTCATAGACAATATCACAAGGCCATACACCTTTGTCAAATTCGATGGTATAATTGCTAACTTTAGCAGACAATATATTGACACAAGAACTCAGGCCAACCTATCAAAACTTAATGCTAACAGGAAACAAGATTTAGATATTATTACTGAAGACATGTCCAACATCTTAGAAAGGAGGAGAAATTCAGAAACATTGGAAAGGTCACAAGTCACTCCTCAACCTGCATCTTCAATATGGTGTTCACCATGCTTAGAGGTAATTGCACTGAAATGGGTACCTATAATGATCACTGTTATCACTTCAATGACCCTTCTATGGGCTATTTTAGTCCTCACAGACGACTATATTGTTACGAGTTGGTGA 672 0.3765 MVKITIVGRARDGLPLAQRVRYMNEENCYVSCYRQQAEFILQEISRGAFMASKFTIPVDHCSFNCLVENGVVFIVLCDSSYPRKLAFHYLQDLQKEFDKFNKTLIDNITRPYTFVKFDGIIANFSRQYIDTRTQANLSKLNANRKQDLDIITEDMSNILERRRNSETLERSQVTPQPASSIWCSPCLEVIALKWVPIMITVITSMTLLWAILVLTDDYIVTSW 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03133 223 CDD Longin 5 128 IPR010908 -
Arst9g03133 223 ProSiteProfiles Longin domain profile. 6 121 IPR010908 -
Arst9g03133 223 SUPERFAMILY SNARE-like 1 128 IPR011012 -
Arst9g03133 223 SMART Longin_2 36 120 IPR010908 -
Arst9g03133 223 Pfam Regulated-SNARE-like domain 37 118 IPR010908 -
Arst9g03133 223 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 210 IPR044565 GO:0005484|GO:0006888|GO:0006890
Arst9g03133 223 Gene3D Longin domain 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03133 Arst-Chr9 108979169 108981572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03133 51 168 Miscellaneous Gene Families AT3G54300 27.338 3.51e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03133 K08517 - gmx:100781527 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03133 9 108979169 108981572 Arst9g03133 9 108979169 108981572 ECH