Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03126 ATGAATTCAGTAACTCTTTTAGGTCCAAGAATAGTTCACAAGATTCCCCATTGCTTGATTATGTCACGGAAATTATGTGACGGTATTTTTCATGGTGATGATGGGTTTGAATGCGTCGAGGAACCTTTAAAAAGGATAGTTTCGGAGTATGATTCCAACGAGGGTGAAAGGCTCCATGTGGATGAGGATTGGAGCTGTAACCATAATCAGTTTTCGCTTAGAAGAGAGTTCTTAGAGAATGTGAAGCTAGATGCCAAGAAGGTCCTTGAGGTTCTTCGACAAGATGGACCAGGTCTTGATGCTAGGTTAGTTTTAGATGAATTGAATGTAAGTCCGTCCGGGATTCTTGTCAGAGAAGTTCTCGCTGGAATCTTGAAGAGCATAAATTTTGAGAATAAAACCAGGTGTGCCAAATTGGCATACAAGTTTTTAGTGTGGTGCAATCAGCAGGAGGATTACAGGCCCACTTCAAATGCATATCACCTGATGATGAACATATATGCCGAGTGCCTGGAGTTTAAGGCTTTGTGGAGGTTGGTTGATGAGATGATCGAGAAAGGGTTTCCTGCTACTGCTCGTACGTTCAACATTTTGATTCGAACTTGTGGTGAGGCAGGTTTAGCTAAGAAATTGGTGGAGAGGTTTATTAAATCAATGAATTTTAATTATAGGCCTTTTAAGCACTCCTACAATGCGATTCTGCATGGTCTTTTTGTGTTAAGCCAGTACAAGTTGATTGAGTGGGTTCATCAACAAATGTTGCTGGAGGGTTTTTCTTCAGATGTTTTAACATACAATATTGTCATGTTTTCTAAGTACAAACTTGGAAAGATGGATCAGTTCCACATACTGCTGGATGAGATGGGTAGGAATGGATTTTCTCCAGATTTTCACACCTATAACATTCTTCTTCATGTTCTTGGTAAAGGAGACAAGCCCCTTGCAGCTCTTAATCTTCTAAATCTCATGAGAGAAACAGGTATAGAGCCAACAGTGCTTCATTACACCACATTGATAGATGGACTCAGCAGAGCTGGGAATGTGGATGCATGCAAATACTTTTTTGATGAAATAATAAAGAATGGGGGCACGCCTGATGTGGTGGCTTACACTGTAATGATAACAGGATATGTAGTGGCAGGTGAGCTTGAGAAAGCTCTGGAAATGTTTCGAGAGATGATTTCTAGAGAACAGGTCCCAAATGTGTTTACATACAATTCCATAATTCGGGGATTATGTAAGGCACGAAAGTTCAAGGAAGCCTGCTCAATGCTCAAGGAGATGGAGACCAAAGGTTGTAGTCCAAATTTTGTTGTCTATAATACATTAGTGAGTAGTTTGCGCAATGCCGGAAGAACCAACGATGCTCATGAAGTGATAAAACAGATGATGGAGAAGCGGAAGTATGGTCACATACTTTCGAAATTTCAAAAGGACTAA 1440 0.4042 MNSVTLLGPRIVHKIPHCLIMSRKLCDGIFHGDDGFECVEEPLKRIVSEYDSNEGERLHVDEDWSCNHNQFSLRREFLENVKLDAKKVLEVLRQDGPGLDARLVLDELNVSPSGILVREVLAGILKSINFENKTRCAKLAYKFLVWCNQQEDYRPTSNAYHLMMNIYAECLEFKALWRLVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKSMNFNYRPFKHSYNAILHGLFVLSQYKLIEWVHQQMLLEGFSSDVLTYNIVMFSKYKLGKMDQFHILLDEMGRNGFSPDFHTYNILLHVLGKGDKPLAALNLLNLMRETGIEPTVLHYTTLIDGLSRAGNVDACKYFFDEIIKNGGTPDVVAYTVMITGYVVAGELEKALEMFREMISREQVPNVFTYNSIIRGLCKARKFKEACSMLKEMETKGCSPNFVVYNTLVSSLRNAGRTNDAHEVIKQMMEKRKYGHILSKFQKD 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03126 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 436 466 IPR002885 -
Arst9g03126 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 261 295 IPR002885 -
Arst9g03126 479 Gene3D Tetratricopeptide repeat domain 69 241 IPR011990 GO:0005515
Arst9g03126 479 Gene3D Tetratricopeptide repeat domain 242 342 IPR011990 GO:0005515
Arst9g03126 479 Pfam PPR repeat family 365 414 IPR002885 -
Arst9g03126 479 Pfam PPR repeat family 261 307 IPR002885 -
Arst9g03126 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 366 400 IPR002885 -
Arst9g03126 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 331 365 IPR002885 -
Arst9g03126 479 Pfam PPR repeat 327 357 IPR002885 -
Arst9g03126 479 Pfam PPR repeat 431 463 IPR002885 -
Arst9g03126 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 401 435 IPR002885 -
Arst9g03126 479 NCBIfam pentatricopeptide repeat 438 466 IPR002885 -
Arst9g03126 479 NCBIfam pentatricopeptide repeat 368 402 IPR002885 -
Arst9g03126 479 NCBIfam pentatricopeptide repeat 403 436 IPR002885 -
Arst9g03126 479 NCBIfam pentatricopeptide repeat 335 367 IPR002885 -
Arst9g03126 479 NCBIfam pentatricopeptide repeat 298 332 IPR002885 -
Arst9g03126 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 296 330 IPR002885 -
Arst9g03126 479 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 295 467 - -
Arst9g03126 479 Gene3D Tetratricopeptide repeat domain 347 479 IPR011990 GO:0005515
Arst9g03126 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 156 190 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03126 Arst-Chr9 108940798 108942850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03126 153 466 Glycosyltransferase AT1G05670 26.115 1.74e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03126 - - ccaj:109794849 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03126 9 108940798 108942850 Arst9g03126 9 108940798 108942850 ECH