Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01986 ATGGACTCTATACTCCACCCTCACCCACTCCATTCCCATTCCCTCCGTTCACCATTCCCATTCCAATTCCCAATCGGAAACCAAAAACTCATTCCCAATTTAAACCTTCTCCGGAACAACAACAACCCCATCTCTATCACGCGCGCTTCCACAACCACACCCAAACACCAAAACCGAAACGACATCGGAGTAGCCTCACCTCCCAAATGCCTCTTCAAGGAAGCGCTCTTTTGTTTCACCCTTGGAGTTACGGCCCTCGGCGCCTTCTCCTCTCCTCCTACGGCAACTGCAATTGCCGTCCCTGCCGTTGTGAAAGATGTCTTTTCCTGGAAGAAGAAAAACGGCGGGAAAGAGAAGGCGAAGAGTGGTCATGAGTACGCTGATTGCACCGAGAAGCTTCTAGAAACGGTTTCGGTTCTTCTGAGGACTGTGGAAGGTGTTAGGAACGGGAACGGGGGAATGGAGGAGGTGGGGGCGGCGATGAAGGCGGTGAATGAGAAGAAGGAGGAGGTGCGTGGGGAGATCAATGACAGGCTGTACCCGCAGTTGAGAGTTCTGAGAAGGCAGAAGGGTGCGTTGGGGAAACGCGCCGGGCAGATAATCGATGAGATTTTGGCTGCGAAAGGCGAGTATGAAAAATTGAGGAGGAAGGAGAAGAAGAAGGGGTTGGAGGAGGAAGAGAAGTTGACGGTGGAGACGATAGAGAAGAAGGTTGCGGAGTTGGAGGATGAGTACAATGGGATATGGGAGAAAGTTGGGGATCTTGAAGACGCGATTTCAAGGAAGGAGACGGTGGCTTTGAGTTATGGAGTCAGGGAGATTAACTTCATTCAGTGGGAGTGTGAGCAGATGGTGGAGAGGTTTAAGCGAGAAATGAGGCACAAGGAGAAGACCAAAAGTTTGTCTGCAAGTCCAGTTACCAGTCTCTCAAAATTGGACGTTCAAAAGGACTTGGAAACTGCACAGAGAAAACATTTAGAACAAATCATTCTTCCTAGTATTTTGGATGTTGAAGATCTTGGGCCATTCTTTCATCAAGATTCCATTGATTTTGCTCAAAGATTGAAAAGACGTCTTCAAGAATCATGGGATATGCAAAGAAATTTAGAGGCTCAGATAAGAAAACATATGAAGAAGTTTGGCAAGGAAAATCGCTATATTGTTTCCTCACCAGAAGAAGATGTGATTAAGGGTTTTCCTGATGTTCAGTTAAAGTGGATGTTTGGAAATAAGGAGGTTGTGGTTCCTAAAGCTGTTAGCCTTCATTTGTACCATGGTTGGAAGAAGTGGCGCGAAGAAGCTAAAGCGGATTTAAAACGCAATTTAATGGAAGATGCTGAGTTTGGCAGAAAATATGTGGCTGAAAGACAGGAAAGGATTCTTTTGGACCGTGATCGAGTAATGTCATGGGCATGGTACAATGAAGAGAAAAATAGATGGGAAATGCATCCCGTGGCTGTTCCTTATGCTGTCTCCAGAAAGCTAATAGAGCATGCTCGGATTAGGCACGATTGGGGTGCCATGTATGTTGCATTAAAGGGGGAGGAGAAAGAATTTTATGTTGACATAAAGGAGTTTGAAATGCTTTTTGAAGATTTTGGGGGTTTCGATGAGCTGTATATGAAAATGCTTGCCTCTGGTGTTCCAACAGCTGTTCATCTGATGTGGGTTCCTTTCTCAGAGCTGGACTTCCGTCAGCAGTTCCTTCTGATATTTAGGGTGTCTCGCTGGGTTTTTAATGGGCTGTGGAATTCTGAAGTTGTTGTGAAAGCAAGAAATCGGATCTTTACAGAACTTAAGGATATAACTGATGACTTAATGATGGTGATAGGGTTTCCTATTGTGGAGTTTTTAGTCCCTTATCCGGTGAGGATGAGATTAGGAATGGCTTGGCCAGAGGAAATATATCAGACAGTTGACGCCACGTGGTACTTGAAATGGCAATCAGAGGCAGAATTCAATTATAAATCCAGATTAACGGATGAACTCACTGGATGGTACTTTTGGTTTTTTGTTAGAGCTGCTGTATTCGGATTTGTTATGTTTCATGTGTTCAAATTTTTGCGGAGAAAAGTCCCACGTCTGTTTGGCTATGGTCCTTTTCGAAGAGATCCAAATATGCAGAAGTTGCGCCGAGTGAAGTATTATGTTAACCAAAAATTAAGAAGAATAAAGCAGAAGAGAAAGGATGGTGTTGACCCCATAAAGACAGCTTTTGAACAGATGAAGAGGGTGAAGAAACCACCAATACCTTTGAAGAATTTTGCAAGTATTGAGTCTATGAAAGAGGAAATCAATGAAGTTGTGGCATTTTTGCAAAATCCAAGGGCATTTCAAGAAATGGGTGCACGGGCACCTCGGGGAGTTCTTATTGTAGGCGAGAGGGGTACAGGAAAGACATCTCTAGCACTGGCTATCGCTGCCGAGGCAAGAGTGCCAGTTGTTGAAATTAAGGCCCAACAATTGGAAGCTGGCTTGTGGGTTGGACAAAGTGCATCTAATGTTCGGGAATTGTTTCAGACAGCAAGAGATTTGGCTCCTGTAATAATATTTGTGGAGGATTTTGACCTTTTCGCTGGTGTACGTGGCACATTTATTCATACCAAAAATCAGGATCATGAATCTTTCATTAATCAACTGCTTGTGGAACTTGATGGCTTTGAGAAACAAGATGGGGTTGTTTTGATGGCTACTACAAGAAATCTCAAACAAATTGACGAAGCCTTGCAGAGGCCAGGTCGCATGGATAGAATATTTCATCTTCAAAGACCGACTCAAACAGAGAGAGAAAAAATATTATACTTGGCAGCAGAGGAAACCATGGATGATCAGCTTATTGATTATGTAGACTGGAAAAAGGTTGCTGAGAAGACAGCTCTTTTACGGCCTATTGAATTAAAACTCGTACCTGTTGCTTTAGAAGGAAGTGCCTTCCGAAGCAAAGTTCTTGACACAGATGAATTGATGAGCTACTGTGGTTTATTTGCAACTTTCAGTTCTGCAATTCCCTCGTTTCTGCGGAAGACTAAAATTGCCAAGATGTTAAGCAAAGCATGGGTGAATCATCTTGGACTGACATTGACAAAGGAGGATCTGCAGAGTGTTGTTGATTTGATGGAACCATATGGTCAGATAAGCAATGGGATAGAGCTTTTGAGTCCCCCACTTGATTGGACGAGGGAAAGCAAATTTCCACATGCTGTCTGGGCAGCTGGCCGTGGTCTTATTGCTCTTTTATTACCAAATTTTGATGAGGCTGACAATTTATGGCTTGAACCACTATCCTGGCAGGGAATCGGATGTACAAAAATCACAAAAGCAAGAAATGAAGGCTCCATTAATGGAAATTCAGAATCAAGATCATATCTTGAAAAGAAACTTGTCTTTTGTTTTGGATCACATGTTGCATCTCAAATGCTACTTCCTTTCGGGGAAGAAAACTTTCTGTCTTCATCTGAGATACAACAGGCGCAAGAGATTGCTACAAGAATGGTCATTCAGTATGGTTGGGCCCCAGATGACAGTGCTGCAATTTATTACCATAGCAATGCGTCTACTGCACTAAGCATGGGGGATGATCATGAGTATGTGATGGCGGCTAAAGTTGAAAAGATGTTTGATTTGGCATATCTCAAAGCAAGTCAAATGCTACGGAAAAATCGGCAGGTGCTAGAAAAGATTGTAGAGGAGTTACTTGAGTTTGAAATTTTGACTGGAAAGGATTTGGAAAGAATTACCAAGGATAATGGTGGAATCAAAGAGAAAGAACCTTTTTCTCTTTGTGAACTTCAAGCTAGTGAGCCAACATCCCGCGGATTCCTTGAAAGTGGAAACGCATTGGAAGTGCTCTCCTAA 3855 0.4327 MDSILHPHPLHSHSLRSPFPFQFPIGNQKLIPNLNLLRNNNNPISITRASTTTPKHQNRNDIGVASPPKCLFKEALFCFTLGVTALGAFSSPPTATAIAVPAVVKDVFSWKKKNGGKEKAKSGHEYADCTEKLLETVSVLLRTVEGVRNGNGGMEEVGAAMKAVNEKKEEVRGEINDRLYPQLRVLRRQKGALGKRAGQIIDEILAAKGEYEKLRRKEKKKGLEEEEKLTVETIEKKVAELEDEYNGIWEKVGDLEDAISRKETVALSYGVREINFIQWECEQMVERFKREMRHKEKTKSLSASPVTSLSKLDVQKDLETAQRKHLEQIILPSILDVEDLGPFFHQDSIDFAQRLKRRLQESWDMQRNLEAQIRKHMKKFGKENRYIVSSPEEDVIKGFPDVQLKWMFGNKEVVVPKAVSLHLYHGWKKWREEAKADLKRNLMEDAEFGRKYVAERQERILLDRDRVMSWAWYNEEKNRWEMHPVAVPYAVSRKLIEHARIRHDWGAMYVALKGEEKEFYVDIKEFEMLFEDFGGFDELYMKMLASGVPTAVHLMWVPFSELDFRQQFLLIFRVSRWVFNGLWNSEVVVKARNRIFTELKDITDDLMMVIGFPIVEFLVPYPVRMRLGMAWPEEIYQTVDATWYLKWQSEAEFNYKSRLTDELTGWYFWFFVRAAVFGFVMFHVFKFLRRKVPRLFGYGPFRRDPNMQKLRRVKYYVNQKLRRIKQKRKDGVDPIKTAFEQMKRVKKPPIPLKNFASIESMKEEINEVVAFLQNPRAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVEIKAQQLEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGTFIHTKNQDHESFINQLLVELDGFEKQDGVVLMATTRNLKQIDEALQRPGRMDRIFHLQRPTQTEREKILYLAAEETMDDQLIDYVDWKKVAEKTALLRPIELKLVPVALEGSAFRSKVLDTDELMSYCGLFATFSSAIPSFLRKTKIAKMLSKAWVNHLGLTLTKEDLQSVVDLMEPYGQISNGIELLSPPLDWTRESKFPHAVWAAGRGLIALLLPNFDEADNLWLEPLSWQGIGCTKITKARNEGSINGNSESRSYLEKKLVFCFGSHVASQMLLPFGEENFLSSSEIQQAQEIATRMVIQYGWAPDDSAAIYYHSNASTALSMGDDHEYVMAAKVEKMFDLAYLKASQMLRKNRQVLEKIVEELLEFEILTGKDLERITKDNGGIKEKEPFSLCELQASEPTSRGFLESGNALEVLS 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01986 1284 Pfam Peptidase family M41 1117 1245 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Arst9g01986 1284 FunFam ATP-dependent zinc metalloprotease FtsH 3 1057 1254 - -
Arst9g01986 1284 Coils Coil 224 244 - -
Arst9g01986 1284 SUPERFAMILY FtsH protease domain-like 1059 1256 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Arst9g01986 1284 Pfam ATPase family associated with various cellular activities (AAA) 789 922 IPR003959 GO:0005524|GO:0016887
Arst9g01986 1284 Coils Coil 154 174 - -
Arst9g01986 1284 PANTHER METALLOPROTEASE M41 FTSH 317 1247 - -
Arst9g01986 1284 SMART AAA_5 785 925 IPR003593 GO:0016887
Arst9g01986 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 746 957 IPR027417 -
Arst9g01986 1284 Gene3D - 731 942 IPR027417 -
Arst9g01986 1284 Gene3D Peptidase M41 1057 1253 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Arst9g01986 1284 FunFam ATP-dependent zinc metalloprotease FtsH 3 731 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01986 Arst-Chr9 55168007 55179182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01986 750 933 Miscellaneous Gene Families AT3G47060 43.784 2.98e-39 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01986 - - gmx:100794385 1893.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01986 9 55168007 55179182 Arst9g01986 9 55168007 55179182 ECH