Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01713 ATGTTTAAGAACATCATCGACGCTGTCACTGGCGGAGGCGACATGCAGAACCACCGCCAGACAGTGAAAGGGACGGTGGTGCTCATGAAAAAGAACGTGTTGGACTTCAACGATTTCAGTGCTTCCCTCCTCGATCGCCTTCATGAGTTTCTCGGAAAACGAGTCTCTCTCCAACTCATAAGTGCCGTCAACGCTGATAATCATGGAAATGGGCTGAAGGGGAAGCTAGGTAAGGCTGCATACTTGGAAGATTGGATCACCACATTCACACCATTGACAGCAGGAGAAGCAGCATTCACAGTTACTTTTGATTGGGACAATGAGGAGATAGGAACACCAGGTGCATTTCTAATTAGGAACAACCATCACAGTGAGTTTTACCTTAAAAGCCTCACACTTGAAGATGTTCCTTCCCATGGTGTCATTCACTTTCCTTGTAATTCTTGGGTTTACCCTGCTAGTAAATATCAAAACGACCGCGTTTTCTTCTCCAACAAGACATACCTTCCAGCTGAAACACCAATATCACTGCTCAAGTATAGAGAAGAAGAACTAGAGAATTTAAGAGGGGATGGAAAGGGCCAGCTCCAAGAGTGGGACAGAGTCTATGATTATGAAGTCTACAATGACCTGGGAAATCCAGATAAGGGTCCACAACATGCTCGTCCAGTTCTTGGAGGGTCCACCGAATATCCATACCCTCGAAGAGGAAGAACCGGTAGAGCACCAGCTAAATCAGATCCAAAGTATGAGAGTAGGTTGAATCTTGCTTTGAGCTTAAACATATATGTTCCAAGGGATGAAAGATTTGGTCACTTGAAGTTGGCGGATTTTCTCTCATATGCACTGAAATCTATAGTCCAAGTTCTCAAACCGGAATTCGAATCAATATTCGACAAAACCCCTAATGAGTTTGACAGCTTTGAAGATGTACTCAAACTATATGAAGGTGGACTTGAAGTGCCTGAGGGTGTAATTAAGGTTATTCGGGATAATGTTCCTCTTGAGATGCTCAAGGAAATTTTTCGCACCGATGGTGAAAGGTTCCTCAAATTTCCTCTGCCTCAAGTGATTGCAGTGGATAAGTTTGCATGGAGAACAGACGAAGAATTTGCGAGAGAGATGTTGGCCGGAATAAACCCGGTTATGATCCGCCGTCTCGAAGAATTCCCACCAGCAAGCAAGCTAGACCCAAAAGTCTACGGTGATCAAACCAGCACAATAACAAAAGAACACATTGAAAGTAATTTGGAAGGCCACACAATTAATGAGGTAATCCGAGAAAGGAAGTTATTCATATTGGATCACCATGATGCACTAATGCCATACCTGAGAAGGATAAACTCCACTTCTACAAAGACTTATGCTTCCAGAACACTTCTTTTGTTGCAAAAGAATGGGACATTAAAGCCCCTCGCCATCGAGCTGAGTTTGCCGCATCCCGAGGGAGATCAACATGGTGCCATAAGTAAAGTTTTTGTCCCCGAAGAAAATTCCTTGTGGCAACTCGCCAAAGGTTATGTCGGAGTAGTCGACTCCGGCTATCATCAACTTATCAGCCATTGGCTACATACTCATGCAGTCATCGAGCCGTTTATTATCGCGACGAACAGGCAGCTTAGTGTTCTTCATCCAATTTATAAGCTGTTACATCCTCACTATCGCGACACCATGAATATAAATGCGCTTGGAAGGCAGATCCTCATCAATGCAGGTGGTGCTCTAGAGGTAACAGTTTTTACATCAAAATATTCCATGGAGTTTTCCTCTATGCTTTATAAAGATTGGGTTTTCCCGGAGCAAGCACTACCTCAAGATCTTCTCAAGAGAGGAGTGGCTGTTAAAGATTCAAGTTGCCCACACGGCATTAAGCTATTGATCGAGGATTACCCTTTTGCAGTTGATGGACTAGAAATCTGGTTCGCCATCAAGATATGGGTTGAAGACTATTGCAGCGTTTACTACAAGGACGATGAGTCAATCAAGAAAGACGCAGAACTCCAATCTTGGTGGAAGGAAATAAGGGAGAAGGGCCATGGTGACAAGAAAGACGAGCCATGGTGGCCAAAGATGCAGACACGTGAGGAGCTCATTGAAACATGCGCCATCATTATATGGACCGCTTCGGCTCTTCATGCCGCCATCAACTTCGGACAGTATCCGTACGGAGGCTACCCGCCGAACCGTCCAGCCATAAGTAGCAAATTGGTGCCGGAAAAAGGAACGCCCGAGTATGATGAACTGTTGGCGAATCCTGATAAGACTTATCTGAAAACATTCACTTCACAGTTCAAAGCTGTTCTTGGAATTTCACTTGTGGAAATCTTGTCTAGGCATTCTAGTGATGAGGTGTACTTAGGGCAGAGAGACACTGAAAATTGGACGTCGGATGCTGACGCGTTAGAAGCGTTTGCCAAGTTCGGGAAGAAGATTGAAGATATTGAGGAAGGGATGAAGAGAATGAACAATGATGAGAAACTGAGGAACAGATATGGACCTGTTAAGATGCCCTACACTTTGCTTTATCCTTCTAGTGAAGGTGGACTAACTGGAAGAGGGATTCCAAATAGTGTCTCAATCTAA 2583 0.4429 MFKNIIDAVTGGGDMQNHRQTVKGTVVLMKKNVLDFNDFSASLLDRLHEFLGKRVSLQLISAVNADNHGNGLKGKLGKAAYLEDWITTFTPLTAGEAAFTVTFDWDNEEIGTPGAFLIRNNHHSEFYLKSLTLEDVPSHGVIHFPCNSWVYPASKYQNDRVFFSNKTYLPAETPISLLKYREEELENLRGDGKGQLQEWDRVYDYEVYNDLGNPDKGPQHARPVLGGSTEYPYPRRGRTGRAPAKSDPKYESRLNLALSLNIYVPRDERFGHLKLADFLSYALKSIVQVLKPEFESIFDKTPNEFDSFEDVLKLYEGGLEVPEGVIKVIRDNVPLEMLKEIFRTDGERFLKFPLPQVIAVDKFAWRTDEEFAREMLAGINPVMIRRLEEFPPASKLDPKVYGDQTSTITKEHIESNLEGHTINEVIRERKLFILDHHDALMPYLRRINSTSTKTYASRTLLLLQKNGTLKPLAIELSLPHPEGDQHGAISKVFVPEENSLWQLAKGYVGVVDSGYHQLISHWLHTHAVIEPFIIATNRQLSVLHPIYKLLHPHYRDTMNINALGRQILINAGGALEVTVFTSKYSMEFSSMLYKDWVFPEQALPQDLLKRGVAVKDSSCPHGIKLLIEDYPFAVDGLEIWFAIKIWVEDYCSVYYKDDESIKKDAELQSWWKEIREKGHGDKKDEPWWPKMQTREELIETCAIIIWTASALHAAINFGQYPYGGYPPNRPAISSKLVPEKGTPEYDELLANPDKTYLKTFTSQFKAVLGISLVEILSRHSSDEVYLGQRDTENWTSDADALEAFAKFGKKIEDIEEGMKRMNNDEKLRNRYGPVKMPYTLLYPSSEGGLTGRGIPNSVSI 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01713 860 ProSiteProfiles PLAT domain profile. 37 164 IPR001024 GO:0005515
Arst9g01713 860 PANTHER LIPOXYGENASE 19 860 IPR000907 GO:0016702|GO:0034440|GO:0046872
Arst9g01713 860 PANTHER LIPOXYGENASE 19 860 IPR000907 GO:0016702|GO:0034440|GO:0046872
Arst9g01713 860 Gene3D - 496 859 - -
Arst9g01713 860 MobiDBLite consensus disorder prediction 215 247 - -
Arst9g01713 860 SUPERFAMILY Lipoxigenase 169 860 IPR036226 -
Arst9g01713 860 ProSitePatterns Lipoxygenases iron-binding region signature 1. 516 530 IPR020833 GO:0016702|GO:0046872
Arst9g01713 860 FunFam Lipoxygenase 169 273 - -
Arst9g01713 860 FunFam Lipoxygenase 274 363 - -
Arst9g01713 860 Gene3D - 363 495 - -
Arst9g01713 860 Gene3D PLAT/LH2 domain 13 168 - -
Arst9g01713 860 CDD PLAT_LH2 21 165 IPR042057 -
Arst9g01713 860 FunFam Lipoxygenase 495 859 - -
Arst9g01713 860 Gene3D - 169 273 - -
Arst9g01713 860 SMART LH2_4 20 165 IPR001024 GO:0005515
Arst9g01713 860 PRINTS Plant lipoxygenase signature 134 152 IPR001246 GO:0016491
Arst9g01713 860 PRINTS Plant lipoxygenase signature 455 479 IPR001246 GO:0016491
Arst9g01713 860 PRINTS Plant lipoxygenase signature 773 787 IPR001246 GO:0016491
Arst9g01713 860 PRINTS Plant lipoxygenase signature 160 181 IPR001246 GO:0016491
Arst9g01713 860 PRINTS Plant lipoxygenase signature 199 215 IPR001246 GO:0016491
Arst9g01713 860 PRINTS Plant lipoxygenase signature 232 251 IPR001246 GO:0016491
Arst9g01713 860 PRINTS Plant lipoxygenase signature 302 323 IPR001246 GO:0016491
Arst9g01713 860 PRINTS Plant lipoxygenase signature 350 366 IPR001246 GO:0016491
Arst9g01713 860 PRINTS Plant lipoxygenase signature 389 408 IPR001246 GO:0016491
Arst9g01713 860 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 21 168 IPR036392 GO:0005515
Arst9g01713 860 Gene3D - 274 362 IPR027433 -
Arst9g01713 860 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 167 860 IPR013819 GO:0016702|GO:0046872
Arst9g01713 860 PRINTS Lipoxygenase signature 536 556 IPR013819 GO:0016702|GO:0046872
Arst9g01713 860 PRINTS Lipoxygenase signature 498 515 IPR013819 GO:0016702|GO:0046872
Arst9g01713 860 PRINTS Lipoxygenase signature 516 533 IPR013819 GO:0016702|GO:0046872
Arst9g01713 860 Pfam PLAT/LH2 domain 66 163 IPR001024 GO:0005515
Arst9g01713 860 FunFam Lipoxygenase 364 497 - -
Arst9g01713 860 Pfam Lipoxygenase 177 843 IPR013819 GO:0016702|GO:0046872
Arst9g01713 860 Pfam Lipoxygenase 177 843 IPR013819 GO:0016702|GO:0046872
Arst9g01713 860 ProSitePatterns Lipoxygenases iron-binding region signature 2. 543 553 IPR020834 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01713 Arst-Chr9 33228414 33237848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01713 1 860 Acyl Lipid Metabolism Gene Families AT1G55020 67.977 0.0 1242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01713 K15718 - gmx:100802887 1456.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01713 9 33228414 33237848 Arst9g01713 9 33228414 33237848 ECH
Arst9g01713 9 33228414 33237848 Arst9g01713 9 33228414 33237848 PCT