Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01676 ATGTCCGACACCCAACAAACCCTAATGCCCCTTCACTCCCCCGACCCCGACGATAACGACGAATCCCCTCCTAACCAACCCCAACCCGCATCCCCTGACCCAACCCGAACCGGAACCGGAACCAGAACCGCCATCGCCACCGCCCCTTCCCTCCTCCACCTCTCCTTCAACCAAGACTCTGGCTGCTTCGCCGCCGGCACCGACCGCGGCTTCCGCATCTACAACTGCGATCCTTTCCGCGAGATATTCCGCCGTGACTTCGGCCCAGGCGGCGGCACCTCTCTCGTTCACATGCTCTTCCGGTGCAACATCCTCGCCTTCGTCGGCGGCGGACCTGACCCTCGCCACCCTCCGAACAAGGTCATGATCTGGGACGACCACCAGTCGCGGTGCATTGGCGAGCTCTCATTCCGCTCCGAGGTCAAAGGCGTTTGCCTCCGAAGAGACCGAATCGTTGTAGTTCTCGCGCACAAGATTTTCGTGTACAATTTTGCCGACCTGAAGGTTCTTCACCAAATTGAGACAATTGCGAACCCTAAGGGTTTGTGCGAGGTTTCGCACTTGTCCGGGACGATGGTTCTTGCGTGCCCTGGGTTGCAGAAGGGGCAGGTTAGAGTTGAGCATTACGCCTCAAAGAGGACAAAATTCATCATGGCTCATGACTCGAGGATCGCGTGCTTCTCGCTCACGCAGGATGGGAGGTTGCTCGCTACTGCAAGCAGTAAAGGAACCTTGGTGAGGGTTTTCAATACGTTAGATGGGTCCTTGTTGCAAGAGGTGCGGAGAGGTGCAGACCGTGCGGAAATATACAGCCTTGCCTTCTCTCCTACTGCACAGTGGCTAGCTGTTTCGAGTGATAAGGGGACCGTTCATGTCTTCAACTTAAAGGTTGATTCTGGACTTTTGGGGCTTGACAGATCGAATAGTTCATCCGAGTCAAATCCTAGTTCCCCAACAGCTGTTTCATCTCTTAAATTTATGAAAGGTGTTTTACCCAAGTACTTTAGCTCAGAGTGGTCTGTGGCTCAGTTTCGCCTGCAGGAAGGTTTGCAGCATATTGTTGCCTTTGGCCATCAAAAGAATACTATTGTTATACTAGGCATGGATGGCAGCTTTTATCGATGCCAGTTTGATTCTGCAAATGGAGGAGAGATGACACAACTTGAATATTACAATTTCCTCAAGACAGATGAGACATTCTAA 1203 0.5262 MSDTQQTLMPLHSPDPDDNDESPPNQPQPASPDPTRTGTGTRTAIATAPSLLHLSFNQDSGCFAAGTDRGFRIYNCDPFREIFRRDFGPGGGTSLVHMLFRCNILAFVGGGPDPRHPPNKVMIWDDHQSRCIGELSFRSEVKGVCLRRDRIVVVLAHKIFVYNFADLKVLHQIETIANPKGLCEVSHLSGTMVLACPGLQKGQVRVEHYASKRTKFIMAHDSRIACFSLTQDGRLLATASSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLLGLDRSNSSSESNPSSPTAVSSLKFMKGVLPKYFSSEWSVAQFRLQEGLQHIVAFGHQKNTIVILGMDGSFYRCQFDSANGGEMTQLEYYNFLKTDETF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01676 400 Pfam WD domain, G-beta repeat 263 294 IPR001680 GO:0005515
Arst9g01676 400 SUPERFAMILY WD40 repeat-like 50 297 IPR036322 GO:0005515
Arst9g01676 400 Gene3D - 46 381 IPR015943 GO:0005515
Arst9g01676 400 MobiDBLite consensus disorder prediction 1 41 - -
Arst9g01676 400 FunFam Autophagy-related protein 18a isoform A 49 379 - -
Arst9g01676 400 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 48 393 - -
Arst9g01676 400 SMART WD40_4 41 75 IPR001680 GO:0005515
Arst9g01676 400 SMART WD40_4 253 294 IPR001680 GO:0005515
Arst9g01676 400 SMART WD40_4 128 163 IPR001680 GO:0005515
Arst9g01676 400 SMART WD40_4 210 250 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01676 Arst-Chr9 30924470 30928195 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01676 K22991 - gmx:100787427 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01676 9 30924470 30928195 Arst9g01676 9 30924470 30928195 ECH
Arst6g01426 6 14259600 14262571 Arst9g01676 9 30924470 30928195 PCT