Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst9g00819 | GACTATTGGGCTTCTGTGGGATGCTCCATTATGCAATGCAGCAACACAGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTCCTCGGTCCAGAACCATGGAATGTTGCATATGTAGAGCCTAGCATCCGCCCCGACGATAGCCGATATGGAGAAAACCCAAATAGGCTCCAAAGACACACTCAATTTCAGGTCATATTGAAGCCTGATCCTGGAAATTCACAGGACCTTTTTATCCGCAGCCTATCAGCTTTAGGTATTGATGTTACTGCTCATGATATACGATTTGTGGAGGACAATTGGGAGAGTCCAGTTCTTGGTGCTTGGGGTTTAGGCTGGGAAATCTGGATGGACGGGATGGAGATTACGCAATTCACCTACTTCCAGCAGGCAGGAAGTCTCCCGCTATCACCTGTTTCCGTAGAAATCACGTATGGCCTTGAGCGTATCATTATGTTACTACAGGGAGTTGATCATTTCAAGAAGATCAAATATTCCGATGGAATTACATATGGAGAGTTGTTCTTGGAGAATGAGAAAGAAATGAGTGCATATTACTTGGAGCATGCCAGTGTTGATCATGTTCAAAAACATTTTGATTTCTTTGAGGAGGAAGCTCGTAGATTACTTTCTTCAGGCTTAGCAATCCCTGCGTATGATCAGCTTCTAAAAACATCTCATGCTTTCAATATATTAGATTCCAGAGGCTTTGTTGGGGTGACGGAGCGTGCTCGATATTTTGGTCGAATGCGTAGTTTAGCTCGCCAGTGTGCACAACTTTGGTTGAAGACTAGGGAGAATCTTGGCTTCCCTCTTGGTTTCATCTCTGAACCTGATAATTTTGTATTGCCAAAAGAAGTTCTTGAGGCTGCTTGTGAGAAGGTGCATGATCAGTCAAGAGCATTTGTTCTTGAAATTGGAACAGAAGAGATGCCCCCTCAAGATGTTGTAGATGCAAGCAAGCAACTGAAAGATTTGATGCTGCAATTACTAGAGAAACAGAGGTTAAAGCATGGCAACATGCAAGTTTTTGGCACCCCACGCAGATTAGTGGTTGCCATTGAAAATCTTTCCACAAAACAAGCAGAAGTGGAGGTTGAGGTTCGAGGTCCTCCAGTTTCAAAATCGTTTGATCATGAAGGAAACCCAACAAAGGCCATTGAAGGATTTTCCCGTAGATACTCTGTTCCACTGGACTTGGTATACCGAAAGGTTGATGGAAAAACAGAATATGTTTATGCTCGTGTGAAGGAGCTTTCAAGATATTCTTTAGAGGTTCTGTCTGAAGATTTGCCTGCTACTATTTCTAAAATATCATTTCCAAAGACGATGAAATGGAATTCTCAGGTGATATTTAGTAGGCCTATCCGTTGGATTTTGGCTATGCATGGAGATGTAGTAGTCCCGTTTATGTTTGCTGGGGTATTGAGTGGAAACTTATCTCGTGGTCTTCGCAATACTTCTTCAGCTATCCTCCAGGTTGAAAGTGCAGAATCTTATTCAGTTGCAATGAAACATGCGGGAATCAATGTTGCAGTTGAGGACCGCAAGAAAATTGTTGTTCAGCAATCTAATGCATTAGCAGAAAGTGTAAATGGCCAAATTGTTATTCCAACAGGCTTGCTTGATGAGGTTGTAAATCTTGTTGAGGCACCTATTCCAGTGCTTGGAAAGTTTAAAGAAACCTTCTTGGCCCTTCCAAAAGAACTTTTGAGCATGGTTATGCAAAAGCATCAGAAATATTTTGCTGTATGTGATGATGAAGGACAGCTGTTGCCTTATTTTATTGCTGTTGCAAATGGAGCAATTGATGAGACTACTGTGAGGAAAGGAAATGAAGCTGTCCTCAGGGCTCGCTATGAAGATGCCAAGTTCTTTTATGAGATGGACACTCGTAAAAAATTCTCTGAATTCCGGAAGCAACTTAAAGATATTCTGTTTCATGAGAAGCTTGGAACCATGTTGGATAAGATGACTCGTATAGAAAACATGGTGATTATGCTAAGTTGCATCCTGAATATTAGTGAAGATAAACAACAAATCATCCGGGATGCTGCCTCGCTTGCTATGTCTGATCTTGCCACTGCTGTTGTCACTGAATTCACCTCACTTTCAGGAATAATGGGGCGTCACTATGCCATTAGAGATGGATATTCAGAGCAGATTGCAGATGCCTTGTTTGAGATCACGCTTCCTAGATTTTCTGGGGACATGCTACCTAAGAGTGATGCTGGCATAGTTTTGGCCATTGCTGATAGATTAGACAGCCTGGTAGGTTTGTTTTCTGCTGGATGTCAACCTAGTTCTACAAATGACCCATTTGGTCTGCGAAGAATCTCCTATGGTCTTGTACAATTGTTGGTGGAAAAGAACAAAAACCTGAACTTGAAAGAGGCTCTGCAACTTGCTGCAGATGCACAATCCATCAAAGTGGATCCGCATGTAATAGATGATGTATATCAGTTTGTTACTCGAAGATTAGAGCAGTTTCTGGTTGACAAGGGAGTGAGTGCAGAATTTGTTCGTTCTGTCCTTGCTGAGAGGGCAAAATTTCCCAGTCTAGCAGCAAAGTCAGCATATAAAATGGAAGAATTATCAAGAGATACACTTTTCCCTAAAGTGGTTGAAGCATACTCTCGACCAACAAGAATTGTCCGTGGGAAGGAAGGCGAACTTAATATGACGGTGGATGAGGCTGCTTTTGAGACAAATGAAGAGAGAGTTTTATGGAGCACATTTTTGTCAGTTAAAGAGGGCATTAATCCTGGTCTTGACATTGATGATTTTGTTGAGATTTCATCTCAGCTAATACAGCCGCTTGAAGATTTTTTCAACAATGTCTTTGTTATGGTGGATGATGATAAGATCAGAAAAAACAGGCTAGCTATGCTAAAAGAAATTTCTGAGCTTCCAAGAGGAATAGCAGACCTCACAGTTCTTCCAGGATTTTAA | 2961 | 0.4164 | LAATRLPSILLRRRQFASLPASASTPPTSVSPHSTSAQPNTLPQAPTLTFQQAIQRLQDYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERIIMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHVQKHFDFFEEEARRLLSSGLAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRENLGFPLGFISEPDNFVLPKEVLEAACEKVHDQSRAFVLEIGTEEMPPQDVVDASKQLKDLMLQLLEKQRLKHGNMQVFGTPRRLVVAIENLSTKQAEVEVEVRGPPVSKSFDHEGNPTKAIEGFSRRYSVPLDLVYRKVDGKTEYVYARVKELSRYSLEVLSEDLPATISKISFPKTMKWNSQVIFSRPIRWILAMHGDVVVPFMFAGVLSGNLSRGLRNTSSAILQVESAESYSVAMKHAGINVAVEDRKKIVVQQSNALAESVNGQIVIPTGLLDEVVNLVEAPIPVLGKFKETFLALPKELLSMVMQKHQKYFAVCDDEGQLLPYFIAVANGAIDETTVRKGNEAVLRARYEDAKFFYEMDTRKKFSEFRKQLKDILFHEKLGTMLDKMTRIENMVIMLSCILNISEDKQQIIRDAASLAMSDLATAVVTEFTSLSGIMGRHYAIRDGYSEQIADALFEITLPRFSGDMLPKSDAGIVLAIADRLDSLVGLFSAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLNLKEALQLAADAQSIKVDPHVIDDVYQFVTRRLEQFLVDKGVSAEFVRSVLAERAKFPSLAAKSAYKMEELSRDTLFPKVVEAYSRPTRIVRGKEGELNMTVDEAAFETNEERVLWSTFLSVKEGINPGLDIDDFVEISSQLIQPLEDFFNNVFVMVDDDKIRKNRLAMLKEISELPRGIADLTVLPGF | 1044 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst9g00819 | 1044 | SUPERFAMILY | Class II aaRS and biotin synthetases | 49 | 328 | IPR045864 | - | |
| Arst9g00819 | 1044 | Gene3D | Class II aaRS and biotin synthetases; domain 2 | 252 | 331 | - | - | |
| Arst9g00819 | 1044 | MobiDBLite | consensus disorder prediction | 20 | 43 | - | - | |
| Arst9g00819 | 1044 | ProSiteProfiles | Heterodimeric glycyl-transfer RNA synthetases family profile. | 717 | 1006 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | Hamap | Glycine--tRNA ligase alpha subunit [glyQ]. | 48 | 328 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | ProSiteProfiles | Heterodimeric glycyl-transfer RNA synthetases family profile. | 49 | 323 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | PANTHER | GLYCYL-TRNA SYNTHETASE | 47 | 1042 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | PANTHER | GLYCYL-TRNA SYNTHETASE | 47 | 1042 | IPR006194 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | SUPERFAMILY | HD-domain/PDEase-like | 690 | 822 | - | - | |
| Arst9g00819 | 1044 | NCBIfam | glycine--tRNA ligase subunit alpha | 49 | 333 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 180 | 200 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 154 | 178 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 203 | 218 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 288 | 304 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 123 | 143 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | PRINTS | Glycyl-tRNA synthetase alpha subunit signature | 102 | 117 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | CDD | GlyRS_alpha_core | 49 | 327 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | FunFam | Glycine--tRNA ligase, chloroplastic/mitochondrial 2 | 252 | 331 | - | - | |
| Arst9g00819 | 1044 | FunFam | Glycine--tRNA ligase alpha subunit | 42 | 251 | - | - | |
| Arst9g00819 | 1044 | Gene3D | Bira Bifunctional Protein; Domain 2 | 37 | 251 | IPR045864 | - | |
| Arst9g00819 | 1044 | Pfam | Glycyl-tRNA synthetase alpha subunit | 50 | 327 | IPR002310 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | Hamap | Glycine--tRNA ligase beta subunit [glyS]. | 360 | 1041 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | Pfam | Glycyl-tRNA synthetase beta subunit | 363 | 907 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 | |
| Arst9g00819 | 1044 | NCBIfam | glycine--tRNA ligase subunit beta | 363 | 1040 | IPR015944 | GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst9g00819 | K14164 | - | gmx:100787365 | 1761.12 |