Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00795 ATGGAAGCGCTTAAACTGTGGAACCTAACAAGCCAACCACTCAAGAGGCACTTACTTCACTCAACTACTTATCACCTCTTACGCATTTCGTCGAACACCTCACCCACCGGAGCTGCTTCCAGGGCTGCTGGACGCAACCGCCGTGCCCCGGCGTCTCCGACCACTTCGACTTCCGATAGGGAGGCTGTTCGAGCCATTCGCTTGAAGAAGGTTGAAGAACTGAGAAGTAAAGGGCTTGATCCATATGCTTATGGATGGGAGAAAACTCACAGTGCTAATCAGCTGCAAGATATATATAGAGATCTGGGAAATGGTGAGGAAGCAAACGGTGAGAATGACCATGTATCAATTGCAGGAAGAATTGTTGCTAGAAGAGCATTTGGCAAGCTTGCTTTTTTGACACTAAGAGATGATTCTGGGACAATTCAGCTCTATTGTGATAAGGAGAGACTCATAGATGACCAGTTTGAACAGTTGAAAGCTCATGTTGATATTGGTGATATACTAGGTGCAAGAGGTTCAATAAAACGCACAGAGAAAGGAGAACTTTCTGTGTGTGTCCTTTCCTTTGCAATCCTTACAAAATCTCTGCTTCCACTACCTGACAAATATCATGGCTTAACTGATATCGATAAACGCTATCGCCAAAGATACGTAGATATGATTGCAAATCCAGAGGTAGCAGATGTTTTCCGCAAAAGAGCAAAGGTTGTATCAGAGATACGGAGAACAATGGATTCTTTAGGTTACATTGAAGTTGAAACCCCAGTTTTGCAGGGAGCAGCTGGGGGAGCCGAAGCCAGACCATTTATTACACATCATAATTCTCTTGGAAGGGACTTATATTTGAGAATTGCAACTGAATTACATCTGAAGAGAATGCTGGTTGGTGGATTTGAAAAGGTATATGAGATTGGGCGAATATTTAGAAATGAAGGAATTTCAACTCGTCATAATCCTGAATTTACCACAATAGAGATGTATGAAGCATACTCAGACTACCAAAGCATGATGAATTTGGCAGAGGAGATTGTCACTCAATGTGCCCTAGCAGTTCTTGGGAAACTTACCCTAGATTATCAGGGAGTTGAGATATGTCTGGAGAGACCTTGGAGGAGGGAGACCATGCACAACCTTGTTAAAGAAGTTTCCGGCATTGATTTTAGTGAATTGGGAGATGATCTTGAAGTTGCAAAGAAAGTTACTCTTAGTACCCTTGGAAACAATCTTGATGCCAAGGACAAAGCTTCGATTGAAGCTTGCCAATCTGTTGGCCATCTACTTAATGAGGTCTTTGAGGTTGTTGTAGAACCAAAGCTCATCCAACCTACATTTGTTTTAGACTATCCAATTGAAATATCTCCACTGGCCAAACCACACCGAAGATCCATAGGTTTGACTGAGAGATTTGAGCTATTCATTTGTGGCCGTGAGCTAGGCAATGCATTCTCGGAACTGACTCAGACTCCCCCGCAGAGAGGTCGCTTAGAGGATCAAGTTAGACAACATGAAAAGAAGAGAGCCGAGGCTGCTTCAAGAAATGCTGATAAGAAGGAAGGGACGGAAAACGAGGATGACTTATATGAAGTTACTCTTGATGACGACTTTCTAACAGCTTTGGAATATGGAATGCCTCCAGCCTCTGGAATGGGACTTGGAATTGACAGGATCGTGATGCTTTTGACAAATTCTCCCAGCATTCGAGATGTAATAGCCTTTCCAGTATTGAAAGTCCAGCAATAG 1743 0.4309 MEALKLWNLTSQPLKRHLLHSTTSXHLLRISSNTSPTGAASRAAGRNRRAPASPTTSTSDREAVRAIRLKKVEELRSKGLDPYAYGWEKTHSANQLQDIYRDLGNGEEANGENDHVSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCDKERLIDDQFEQLKAHVDIGDILGARGSIKRTEKGELSVCVLSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRKRAKVVSEIRRTMDSLGYIEVETPVLQGAAGGAEARPFITHHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLAEEIVTQCALAVLGKLTLDYQGVEICLERPWRRETMHNLVKEVSGIDFSELGDDLEVAKKVTLSTLGNNLDAKDKASIEACQSVGHLLNEVFEVVVEPKLIQPTFVLDYPIEISPLAKPHRRSIGLTERFELFICGRELGNAFSELTQTPPQRGRLEDQVRQHEKKRAEAASRNADKKEGTENEDDLYEVTLDDDFLTALEYGMPPASGMGLGIDRIVMLLTNSPSIRDVIAFPVLKVQQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00795 581 Gene3D - 61 202 IPR012340 -
Arst9g00795 581 SUPERFAMILY Class II aaRS and biotin synthetases 210 577 IPR045864 -
Arst9g00795 581 MobiDBLite consensus disorder prediction 497 526 - -
Arst9g00795 581 SUPERFAMILY Nucleic acid-binding proteins 62 203 IPR012340 -
Arst9g00795 581 Coils Coil 494 514 - -
Arst9g00795 581 PRINTS Lysyl-tRNA synthetase signature 292 305 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Arst9g00795 581 PRINTS Lysyl-tRNA synthetase signature 247 257 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Arst9g00795 581 PRINTS Lysyl-tRNA synthetase signature 310 327 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Arst9g00795 581 PRINTS Lysyl-tRNA synthetase signature 263 279 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Arst9g00795 581 PRINTS Lysyl-tRNA synthetase signature 443 459 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Arst9g00795 581 Gene3D Bira Bifunctional Protein; Domain 2 206 581 IPR045864 -
Arst9g00795 581 CDD LysRS_core 225 578 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Arst9g00795 581 FunFam Lysine--tRNA ligase 61 203 - -
Arst9g00795 581 Pfam OB-fold nucleic acid binding domain 116 190 IPR004365 GO:0003676
Arst9g00795 581 MobiDBLite consensus disorder prediction 29 61 - -
Arst9g00795 581 MobiDBLite consensus disorder prediction 487 526 - -
Arst9g00795 581 Hamap Lysine--tRNA ligase [lysS]. 67 580 IPR002313 GO:0004824|GO:0005524|GO:0006430
Arst9g00795 581 FunFam Lysine--tRNA ligase 206 581 - -
Arst9g00795 581 CDD LysRS_N 115 222 IPR044136 GO:0000166
Arst9g00795 581 Pfam tRNA synthetases class II (D, K and N) 212 577 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Arst9g00795 581 NCBIfam lysine--tRNA ligase 66 579 IPR002313 GO:0004824|GO:0005524|GO:0006430
Arst9g00795 581 PANTHER LYSYL-TRNA SYNTHETASE 46 580 - -
Arst9g00795 581 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 232 575 IPR006195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00795 Arst-Chr9 7596359 7604353 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00795 K04567 - gmx:100787720 974.926