Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00682 ATGTATCGATTAGCTTCCAAGCTAGCCTCCTCCATCACTTCCTCAACCTCAAAGAACGTTATACGCTGCAGGGTTATTTCAAGTAGAAACTATGCGAGCAAAGACATCAACTTTGGCGTCGGAGCTCGTGCTGCAATTCTTCAGGGTGTCACTGAGGTTGCTGATGCTGTCAAGGTTACGATGGGACCTAAGGGTCGTAATGTGATTATTGAGAAAAGTTATGGGAACCCAAGGATCACAAAGGATGGTGTGACAGTAGCTAAGAGTATCAAATTTCAGGATAAGGCTAAGAACATTGGTGCTGATCTTGTTAAGCAGGTTGCCAAGGCTACCAACGCTGCTGCTGGAGATGGTACAACTTGTGCGACTGTGTTAACTCAGGCAATACTGATAGAAGGTTGCAAATCGATTGCAGCTGGTGTAAATGTCATGGATTTGCGCAATGGAATAAATAAGGCAGTTGATGCTGTAATTACTGATTTGAAAAGCAGGGCAGTAATGATAAGCACACCTGAAGAGATAACCCAGGTTGGGACTATATCTGCAAATGGAGAGAGAGACATTGGTGAATTGATTGCAAAGGCAATGGAAAAAGTTGGAAAGGAAGGAGTTATTACCGTTGCTGATGGAAACACTTTGGACAATGAGTTGGAAGTTGTTGAAGGAATGAAGTTGGGCAGAGGCTATATATCTCCCTATTTTATTACTGATCAGAAAACCCAGAAATGTGAATTGGATCACCCCCTTATCCTCATCCATGACAAGAAAATTTCAGACATGAATTCATTATTGAAAATATTGGAACTGTCAGTTGAGAAAAAAAGACCGCTCTTGGTTGTAGCAGAAGATGTTGAGAGTGATGCATTGGCTATGCTCATACTAAACAAGCATCATGCTGGGCTTAAGGTTTGTGCTATAAAAGCTCCTGGTTTCGGTGATAACAGAAAAGCAAATCTAGATGATCTTGCAATTCTTACTGGAGGAGAGGTCATCACAGAAGAGCGTGGTTTTACTCTTGACAAAGTCCTACCAGAAATGCTTGGTACTGCCAAAAAGGTTACTATCTCCATTGATGACACTATCATTCTACATGGAGGTGGGGATAAGAAACTCATTGAAGAGAGATGTGAGGAGCTTAGGACAGCAATGAACAAGAGTTCTGCCACGTTCGATAAAGAAAAAGCACAAGAACGCCTATCAAAACTATCCGGTGGTGTAGCTGTCTTCAAGGTTGGAGGCGCTAGTGAGGCAGAAGTTGGGGAAAGGAAAGATCGGGTGACAGATGCCCTAAATGCCACTAAAGCAGCAGTCGAGGAGGGAATTGTTCCAGGTGGTGGAGTTGCTCTCTTATATGCTACAAAAGTGTTGGAGAACCTCGAAACAAAGAACGAGGATGAGAAAAGAGGAGTACAGATTATTCAGAATGCACTTAAGGCACCTACCCTTACAATAGCTTCAAATGCTGGTTTCGATGGCACTTTGGTTCAGAGCAAATTGTTAGAACAAGACAATCATAATTTGGGTTTTGATGCTTCCAAAGGTGCCTATGTTGATATGATAAAGGCTGGAATCATAGATCCTGTTAAAGTTGTTAGAACAGCTTTGGTAGATGCTGCCAGTGTCTCATTGCTACTGACAACAACGGAGGCAGCTATTGTGGATAATCCAAAGGACAAAAATAAAGCTCCCAGCCGGGTGCCAGATATGGATGCCTTGGATATCTAA 1725 0.4255 MYRLASKLASSITSSTSKNVIRCRVISSRNYASKDINFGVGARAAILQGVTEVADAVKVTMGPKGRNVIIEKSYGNPRITKDGVTVAKSIKFQDKAKNIGADLVKQVAKATNAAAGDGTTCATVLTQAILIEGCKSIAAGVNVMDLRNGINKAVDAVITDLKSRAVMISTPEEITQVGTISANGERDIGELIAKAMEKVGKEGVITVADGNTLDNELEVVEGMKLGRGYISPYFITDQKTQKCELDHPLILIHDKKISDMNSLLKILELSVEKKRPLLVVAEDVESDALAMLILNKHHAGLKVCAIKAPGFGDNRKANLDDLAILTGGEVITEERGFTLDKVLPEMLGTAKKVTISIDDTIILHGGGDKKLIEERCEELRTAMNKSSATFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATKAAVEEGIVPGGGVALLYATKVLENLETKNEDEKRGVQIIQNALKAPTLTIASNAGFDGTLVQSKLLEQDNHNLGFDASKGAYVDMIKAGIIDPVKVVRTALVDAASVSLLLTTTEAAIVDNPKDKNKAPSRVPDMDALDI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00682 574 SUPERFAMILY GroEL apical domain-like 214 406 IPR027409 -
Arst9g00682 574 Gene3D - 167 440 IPR027410 -
Arst9g00682 574 SUPERFAMILY GroEL-intermediate domain like 168 234 IPR027410 -
Arst9g00682 574 PRINTS 60kDa chaperonin signature 298 321 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 PRINTS 60kDa chaperonin signature 57 83 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 PRINTS 60kDa chaperonin signature 113 140 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 PRINTS 60kDa chaperonin signature 428 449 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 PRINTS 60kDa chaperonin signature 380 405 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 31 563 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 MobiDBLite consensus disorder prediction 555 574 - -
Arst9g00682 574 Hamap Chaperonin GroEL [groEL]. 32 572 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 Gene3D - 36 553 IPR027413 -
Arst9g00682 574 SUPERFAMILY GroEL equatorial domain-like 37 552 IPR027413 -
Arst9g00682 574 NCBIfam chaperonin GroEL 33 557 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 Coils Coil 456 476 - -
Arst9g00682 574 Gene3D GroEL 222 403 IPR027409 -
Arst9g00682 574 ProSitePatterns Chaperonins cpn60 signature. 435 446 IPR018370 GO:0005524|GO:0006457
Arst9g00682 574 FunFam 60 kDa chaperonin 222 403 - -
Arst9g00682 574 CDD GroEL 34 554 IPR001844 GO:0042026|GO:0140662
Arst9g00682 574 Pfam TCP-1/cpn60 chaperonin family 53 555 IPR002423 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00682 Arst-Chr9 6187894 6193101 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00682 K04077 - gmx:100778935 972.615