Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00511 ATGGGTTCCTTCAACTTGTTTTGTTTCTTCATCATCATCTTTCACGTCTTTGTTGCAACACCCATATTCTCACATTCATCATCGTCAATCTCCACAAAATTTCTAGATTTGGCTAAGAGTCCTGAGGTATTTGATTGGATGGTTAGGATTAGAAGGAAGATTCATGAGTACCCGGAATTGCTATATGAGGAATTTAAGACGAGTGAGGTCATAAGAGAAGAGTTGGACAAAATGGGAATTTCATATAAGCATCCAGTTGCTGAAACCGGCGTTATTGGATACATCGGAACTGGAAAACCTCCTTTTGTTGCTTTAAGAGCTGATATTGATGGTCTCCCTATTCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTAGATGGAAAGATGCATGCTTGTGGTCATGATGCTCACACTGCTATGGTCCTTGGTGCTGCAAAGATTCTCAAACACCATGAAGATCAGATTAAAGGCACAGTTGTTCTTGTTTTTCAACCAGCAGAGGAAGGAGGAGCAGGGGCAAAGAGAATCTTAGAGGCAGGAGTACTAGACAAAGTCTCTGCCATCTTTGGATTACACGTGGCGCCGGCACATGAATTACCCGTAGGACACGTGGCATCTAAGGCTGGTCCATTAATGGCAGGAAGTGGAATGTTTGATGCAACTATACATGGAAAGGGAGGCCATGCAGCTATGCCTCACTTCGCCATTGATCCCGTTTTAGCAGCTTCTAGTGCTGTTGTCAGCTTGCAACAACTTGTTTCTCGTGAAGCCGATCCTCTTGATCCCCAGGTAGTTACGGTTACTAATTTCCATGGAGATGGTGCATTCAACGTTATTCCAGATTCTGTTACTATTGGAGGAACCTTCCGAGCTTTTTCCCCCGAAAGCATCACGCGTTTGAAGGACCGCATTCACCAGGTTATCACCGGACAAGCGGCAGTCCATAGGTGCACAGCGGAGGTCGACTTCCATGAAGATAAGAAACCGTTGTATCCGGCAACCATAAACGACGACAAGTTACATGAGCATTTTCTTGAAGTGGCCAAGAATGTTGTTGGAAGCGAGAATGTTCATGAGATGCAACCTGTGACAGTATCCGAAGACTTCTCATTCTATCAAGAAGCTTTACCTGGTTACTTCTTCATGCTTGGAATGAAAAGTCACTCCGGTGAACCACTTGCAACGTTGCACTCACCACATTTCACAGTGAATGAAGATGCTTTAGCCTATGGTGCTGCACTTCATGCTTCCTTAGCTACTACTTATCTTCTAAACCATGATGGAGCCAACAAGGTGGGAGGGAAATATCATGATGAGTTATAG 1326 0.4434 MGSFNLFCFFIIIFHVFVATPIFSHSSSSISTKFLDLAKSPEVFDWMVRIRRKIHEYPELLYEEFKTSEVIREELDKMGISYKHPVAETGVIGYIGTGKPPFVALRADIDGLPIQEMVEWEHKSKVDGKMHACGHDAHTAMVLGAAKILKHHEDQIKGTVVLVFQPAEEGGAGAKRILEAGVLDKVSAIFGLHVAPAHELPVGHVASKAGPLMAGSGMFDATIHGKGGHAAMPHFAIDPVLAASSAVVSLQQLVSREADPLDPQVVTVTNFHGDGAFNVIPDSVTIGGTFRAFSPESITRLKDRIHQVITGQAAVHRCTAEVDFHEDKKPLYPATINDDKLHEHFLEVAKNVVGSENVHEMQPVTVSEDFSFYQEALPGYFFMLGMKSHSGEPLATLHSPHFTVNEDALAYGAALHASLATTYLLNHDGANKVGGKYHDEL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00511 441 NCBIfam amidohydrolase 47 412 IPR017439 GO:0016787
Arst9g00511 441 Pfam Peptidase dimerisation domain 215 312 IPR011650 -
Arst9g00511 441 PIRSF Amidohydrol_AmhX 32 428 IPR017439 GO:0016787
Arst9g00511 441 PANTHER PEPTIDASE M20 FAMILY MEMBER 14 430 IPR017439 GO:0016787
Arst9g00511 441 Pfam Peptidase family M20/M25/M40 104 420 IPR002933 GO:0016787
Arst9g00511 441 FunFam N-acetyldiaminopimelate deacetylase 214 332 - -
Arst9g00511 441 Gene3D Zn peptidases 47 409 - -
Arst9g00511 441 Gene3D - 214 332 - -
Arst9g00511 441 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 324 IPR036264 -
Arst9g00511 441 SUPERFAMILY Zn-dependent exopeptidases 42 426 - -
Arst9g00511 441 CDD M20_IAA_Hyd 47 424 IPR044757 GO:0009850|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00511 Arst-Chr9 4297260 4301323 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00511 K21604 - gmx:100794121 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02223 7 51523308 51526508 Arst9g00511 9 4297260 4301323 PCT