Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00304 ATGCGGGGACGGCAGCGAGTTGCATCCAGAGATTACATAATTGGGCATGGAAAAGAAGAAAATTCAGCTTCAGTGCGTTTACCGAACGCAAAACCTTGGCGGCGATCTTTGCGGCATGTTGTAGTGGCTTCTCTATCTTCATTCTTATATGGCTACCATATTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTGAAGATCTTGACTTTAGTGGGAATACAATGGCTGAAGGTCTTGTAGTAAGTACCTGTTTAGGAGGTGCTTTTGTTGGGTCTCTGTTTAGTGGTTGGATCGCAGATGGGGTTGGGCGTAAAAGAAGTTTCCAGTTGTGTGCATTGCCTATGATAATTGGAGCAGGAATAAGTGCAACAGCAAACAGCCTGTGGGGCATGCTTTTGGGAAGGTTATTTGTTGGTACCGGAATGGGACTTGGCCCACCTGTTGCTGCTCTTTATGTGGCTGAGGTATCACCTCCAGCTGTGCGGGGTACTTTTGGGGCTTTAACTCAGATTGCAACATGTCTTGGACTTATGGGTTCTTTCTTTATAGGAATCCCAGCCAAGGAAATAGTGGGTTGGTATGAAATGATATTATATGTTATCTATCACCCAATTTCACAGTTGCATTTCATATGGAAATTANNNNNNNNNNNTCCACACTGGCTCTTCAAGAGAGGAAGAACCATTGAAGCTGAGGCTGAATTTGAGAAGCTCTTGGGAGGAGTAAATGTGAAATCTGCAATGGCTGACCTGTCAAAGTCTGATAGAGGTGATGAGTCTAGTTCTGTAAAACTATCAGAATTACTCTGTGGCTGCCATGCTAGAGTGATGTTCATTGGTTCTGTGCTTTTTGCTTTACAGCAGCTATCTGGCATAAATGCTGTGTTCTATTTCTCCTCGACAGTCTTTGAAAGCTTTGGTGTACCATCTGATCTTGCAAATACAAGCGTGGGAGTTTGCAATTTATTGGGATCAATTGTAGCAATGATTCTGATGGATAAACTTGGAAGAAAAGTGCTTCTCATGGGTAGCTTTTTCGGCATGGCAGTAGCGATGGGTCTACAAGTTCTTGCTGCAAGTTCATTTGCTGCAGGATCTGGAGCAATGTATCTATCCGTTGGTGGCATGTTGCTGTTTGTGCTATCATTTGCACTTGGGGCCGGTCCGGTTCCTTGTCTCGTTATGTCTGAAATGCTACCCGGCAAGATCAGAGCAAAGGCAATGGCAATTTGCTTGGCTGCGCACTGGGTGATAAACTTCTTTGTGGGTCTACTATTTCTGCGCTTGCTGGAGCAAATTGGGGCACAACTCTTGTATAGTATTTTTGGTTCATTCTGTCTGATAGCAGTGGCTTTTGTGAAGAAGTATATTCTTGAAACAAAAGGGAAGTCACTACAGGAAATTGAGATAGCACTTCTTGCTCAAGAAGCATCATAA 1437 0.4328 MRGRQRVASRDYIIGHGKEENSASVRLPNAKPWRRSLRHVVVASLSSFLYGYHIGVVNETLESISEDLDFSGNTMAEGLVVSTCLGGAFVGSLFSGWIADGVGRKRSFQLCALPMIIGAGISATANSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGTFGALTQIATCLGLMGSFFIGIPAKEIVGWYEMILYVIYHPISQLHFIWKLXXXXPHWLFKRGRTIEAEAEFEKLLGGVNVKSAMADLSKSDRGDESSSVKLSELLCGCHARVMFIGSVLFALQQLSGINAVFYFSSTVFESFGVPSDLANTSVGVCNLLGSIVAMILMDKLGRKVLLMGSFFGMAVAMGLQVLAASSFAAGSGAMYLSVGGMLLFVLSFALGAGPVPCLVMSEMLPGKIRAKAMAICLAAHWVINFFVGLLFLRLLEQIGAQLLYSIFGSFCLIAVAFVKKYILETKGKSLQEIEIALLAQEAS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00304 478 Pfam Sugar (and other) transporter 40 470 IPR005828 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 PRINTS Sugar transporter signature 396 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 PRINTS Sugar transporter signature 132 151 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 PRINTS Sugar transporter signature 287 297 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 PRINTS Sugar transporter signature 373 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 PRINTS Sugar transporter signature 47 57 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 CDD MFS_GLUT_like 42 459 - -
Arst9g00304 478 Gene3D MFS general substrate transporter like domains 34 473 IPR036259 -
Arst9g00304 478 SUPERFAMILY MFS general substrate transporter 26 469 IPR036259 -
Arst9g00304 478 ProSitePatterns Sugar transport proteins signature 1. 328 344 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 ProSitePatterns Sugar transport proteins signature 1. 95 112 IPR005829 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 PANTHER SOLUTE CARRIER FAMILY 2 32 473 IPR045263 -
Arst9g00304 478 NCBIfam sugar porter family MFS transporter 40 468 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst9g00304 478 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 461 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00304 Arst-Chr9 2625049 2630395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00304 5 417 Organic Solute Cotransporters AT1G67300 62.322 6.46e-178 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00304 - - aprc:113857086 783.482