Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00283 ATGGAAGTTAAAGAAGAAGAAGAAGAAGTGAAGTTCTCAGCGTTCCCTTTCAAGCCATATTCGATTCAGATGGAATTCATGAAGGCTCTTTATCACTCTCTCAACCAAGGTGGCGTCTCCATGTTAGAAAGCCCTACTGGTACTGGGAAGACTATGAGTGTTATTTGTAGTGCTTTGTCACAAAAGAAAATTGATACAACAGATGTTGATGACAAGGAGTTTCTACTTGAAGAGTATGAGAGTGAAGAAGAAGGGGATTTAGGGAGTGTGATGTTGAAGAGGAAGGCTACTAAAAGCATGCTTAATTCTTCGAGTGAAGATGAGTCTGATGATGCTGAGGGGGAGGAGGATGAGAAGAAGTTCAAGGTTTATTTCTGTAGCCGAACACATTCACAGCTTTCGCAGTTCATAAAGGAGTTACAGAAGACAATCTTTGCTAATGAGATGACTGTTGTGAGTTTAGGGTCAAGGAAAAATCTTTGCATTAACAAAGATGTGCTTTCACTTGGAAACTCCACACGCATAAATGAGCGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAAGCTACTAGAGTGAAGAACATAAGAGTAGGTGCACACACACGCAGAACAAAGGCCTCTTCTGGTTGCCCAATGCTTAGAAAACATAAACTACAACATGAATTCAGGAATGAGGTATCTGAACGAGGACCCTTGGATATTGAAGATCTTGCAAACCTTGGAAAAACATTGGGAACCTGTCCGTACTATGGCTCTAGAAGCATGGTTGTGAGAGCTGATCTTGTTGTTCTTCCATATCAATCTCTTTTGTCGAAATCATCTCGTGAAGCTCTTGGTCTGAATTTAAAATCCAATATTGTTATAATAGATGAGGCACATAATTTAGCTGATTCACTCATCAGCATGTATGACTCAAAAATTACTTTATCACAGCTGGAGAATGTGCATTGCCATGTAGAATGGTACTTTGTGAGATTCCGGAGTCTTTTGGGACCAGCCAACCGGAGATATATTCAAACTCTGATGGTTCTGACTCAAGCTTTCCTTCGAGTACTACTCAATGAGAAGAATGGAAATCCGATGGATTCTTACCATGACATAGAACATGCTTCTGAAGAAAGTAGAACATCTGATTTTACTATGGCCATCAATGATTTTATCTTTGAACTAAATATAGACAATATCAACTTGATCAAATTGTTAAAGTATATAAAGGAAAGTAATATCATGCACAAGGTTAATAGTTATGGAGAAAAGGTGGCTAATTTGGAGAATACATCAGCACGCAATGAAATTCGGGAACATGGGGAGGAGGGGGGATGTCTGTCTGCTTTCCAGGCATTAGCGGATATATTACTGTCACTGACAAACAATGATAGCGATGGAAGGATAATAGTTTCGAGGTCTAGTTCATCATCAAGCTTTAGGAAACAAGGGGGATATATCAAGTTTGTTATGCTCAGTGGCGAGAAGATTTTCTCTGAGATTGTAGATCAAGCACATGCTGTTCTATTAGTAGGGGGAACTCTTCAACCTATAGAAGAGACAAGGGAGCGATTATTTCCGTGGTTACCACCGAATCAGTTGCATTTCTTTTCATGCGGCCACATTGTCCCTCCAGATAGCATTATGCCAATTGCGATTTCTCGTGGTCCTTCTGGCCGCTCCTTTGATTTTAGCTACAGCTCTAGAAGCTCACTAGACATGATGCGAGAACTAGGCCTTTTGCTATGTAACTTGGTGACTGTGGTTCCTGAAGGAATCGTAGTCTTCTTCCCTTCTTTCGATTATGAAGGTAAAGTGTATGAACTCTGGGGATCTTCTGGCATCATTGAGAGGATTACTAGGAGGAAGCGTATCTTTAGAGAGCCTAGGAATAATATGGAAGTTGAATCTGTTCTAAAGGAATATAAAGATGCCATTTGTGCATTATCAAGTGTGAGTACAGAAGCAAACCAAGCATCTCAAAGTGGTGCAGTGCTCCTTGCTGTTGTTGGTGGGAAGATATCTGAAGGGATCAACTTAAGTGATGGAATGGGTCGGTGTGTCATCATGGTTGGACTGCCATATGCTAGTCCATCTGATATCGAGTTATTGGAAAGGATAAAGCACATAGAAGGTTTTCGAAATTCGAAGTCCATTGAAAATACCCCATTTGGTGCTAGTTGTGATGTATATAGTGGAGATGCACAAGGTGGTTTTGACATCTTAAGAAGTTGCAGCCAGAGAGGGACCCAACATTACACTGTTATATGTATGTATATTGTTTCAGGTAGAGCAATTCGTCATATTAATGACTATGCAGCAATTTTGCTTGTTGATACTAGATATGCATCTGATTCCTCCAAAAGGAGCTTATCCCACCCAGTCAACAAGCTACCACAGTGGATAAAAGATCGTCTTGTTTCTTCCACTAATAACTATGGTGAAGTGCACAGGTTGCTCCATCAGTTTTTCAAATTTAAAAAGAGAAGCTGA 2481 0.4019 MEVKEEEEEVKFSAFPFKPYSIQMEFMKALYHSLNQGGVSMLESPTGTGKTMSVICSALSQKKIDTTDVDDKEFLLEEYESEEEGDLGSVMLKRKATKSMLNSSSEDESDDAEGEEDEKKFKVYFCSRTHSQLSQFIKELQKTIFANEMTVVSLGSRKNLCINKDVLSLGNSTRINERCLELQKKKKNEATRVKNIRVGAHTRRTKASSGCPMLRKHKLQHEFRNEVSERGPLDIEDLANLGKTLGTCPYYGSRSMVVRADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLISMYDSKITLSQLENVHCHVEWYFVRFRSLLGPANRRYIQTLMVLTQAFLRVLLNEKNGNPMDSYHDIEHASEESRTSDFTMAINDFIFELNIDNINLIKLLKYIKESNIMHKVNSYGEKVANLENTSARNEIREHGEEGGCLSAFQALADILLSLTNNDSDGRIIVSRSSSSSSFRKQGGYIKFVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVPPDSIMPIAISRGPSGRSFDFSYSSRSSLDMMRELGLLLCNLVTVVPEGIVVFFPSFDYEGKVYELWGSSGIIERITRRKRIFREPRNNMEVESVLKEYKDAICALSSVSTEANQASQSGAVLLAVVGGKISEGINLSDGMGRCVIMVGLPYASPSDIELLERIKHIEGFRNSKSIENTPFGASCDVYSGDAQGGFDILRSCSQRGTQHYTVICMYIVSGRAIRHINDYAAILLVDTRYASDSSKRSLSHPVNKLPQWIKDRLVSSTNNYGEVHRLLHQFFKFKKRS 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00283 826 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 9 821 IPR045028 -
Arst9g00283 826 Gene3D - 18 350 IPR027417 -
Arst9g00283 826 NCBIfam DNA repair helicase (rad3) 14 809 IPR013020 GO:0003678
Arst9g00283 826 SMART deadxpd 11 336 IPR006554 GO:0003678|GO:0016818
Arst9g00283 826 SMART Cxpdneu3 596 780 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Arst9g00283 826 Pfam Helicase C-terminal domain 578 791 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Arst9g00283 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 304 IPR027417 -
Arst9g00283 826 Gene3D - 556 794 IPR027417 -
Arst9g00283 826 Pfam DEAD_2 125 313 IPR010614 GO:0003677|GO:0003678|GO:0005524
Arst9g00283 826 SMART ultradead3 15 371 IPR014001 -
Arst9g00283 826 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 9 352 IPR014013 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00283 Arst-Chr9 2475222 2479970 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00283 K11273 - gmx:106794132 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00283 9 2475222 2479970 Arst9g00283 9 2475222 2479970 ECH