Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00220 ATGCCACATGTACTTATAAATTCCCACCATCCATTACCAAAACTCCAAAACATATCTTATTGTGCAACCAATAGTATGGCTACTTCCTTTTCCAACCAAATTACAATCATTCTTTTTTGTTTACTATCTACAATCATCTTTAACTCATCATCACTAGTTATGTGTAATTCTATGATCATTCATTGTGATAAGAAGGATGAGAACACATTGCTCAAGTTTAAACATGAAGTCACAGATCCTTCTGGAGTACTCTCATCTTGGTCTTCTGATGAAGAAAAAGATTGTTGTCAGTGGAGAGGAGTTCATTGTGATAACATCACACACAGAGTTATAGAGCTTCATCTCCCTTGTGATACAATCCAATCTGATGAAATTCTTGATAAAGATAATGCGAAACCGCACTGTCTAACAGGTGAATTCGACATGTCTTCTTTGTTTGATCTTGAATTTCTGAGTTACTTGGATTTGAGTAACAATGATTTCAAGACCATCAAATATGATTTCAATTCTATTCATAACAACAAGACATGTAATGACTCCTCCAACATTCATTATCTTGATTTAGCATATAACTATCATCTTTTCAGTGATTATAATAATATGCTACATCAGATTTCTCATCTTTTTTCCTCTTTGCAATTTCTGGACCTCAGTGGTATTGATTTTTACAAGGAAACCGATTGGCTTCAATCACTGACCTCACTTTCTTCACTTTTAGAGTTACACTTAGATGATTGCAGTCTTAAAGATATAAATCCATCTCTTCAGTATGCTAATTTGACTTCACTTAAGGTTCTTAGTCTTGTTTCCAATGACTTCTCAACAATCTTACCTTCTTGGTTATTCAATCTTAGTCACATCTCATACATTGACCTTTCAGAGAATTACCTTCATGGCCAATTACCTCAAACACTACCAAAATTTCATCAAAGCATTGAATCCTTGTGTTTGTATACCAATGATCTTGATGGACCCATTCCGGATTGGTTAGGCCAACTTGATCAACTGAAAGCACTTGCTCTTTCTTATAATAACTTTGATGGTCAAATCTCAACAATTTTGGAAAACTTACCATCCTTATTGATTGAATTGCGTCTGCATTCAAATTTCTTGACAGGAACTGTCTCTGAAAAGAACTTTCATTTGCTTTCCAAGTTAAAGAATTTAGGTTTAGGCTCAGAATACTTAGTCTTTGACTTTGATACCAAATGGATCCCTTCTTTTCAACTTCAAATCTTGGTTTTGGAAAATGTTGGTCCCAAATTTCCATCATGGATATATACACAAAGTTCTCTAGAACTTCTGTTCATTTGGAACTCAAGGGTTTCATTTGAACCTCTTGGAAAGTTCTGGAAGTTTGCTGCTCAACTTGAAGCTTTGGCGTTAGTAAACAACTCCATCAATGCTGACATCTCAAATGTGTTGCTTGATTCCAAAGTTGTAATCATGCAATTGAATAACTTTAGAGGCAGTGTGCCTCAAGTGTCATCAAAAGTGACTTTTTTGGATTTGTCTTATAACAATTTGTCTGACATTTCTCCTTTCTTATGTCAAAAGATGAAGGGGAAAAGGAATTTAGAGACTTTGTTCATATCTGATAATGCATTATCCGGAGAGATTCCAAATTGTTTGATGAATTGGACATCATTACTTCAAGTTGACTTGAGGAACAATAATTTGACTGGCAAAATTCCTCACTCAATTGGCTCATTATCTAGACTAATTTTTTTTAGTTTGGAAAAAAATAAGTTATTTGGAGAGATACCTCTGTCATTAAAAGATTGCAAAAATCTTCAATACCTTATTCTAGGTGGAAATGCATTTTCTGGAACTATACCAAGCTGGATCAATCAAAGAATAAAAATACTTCAATTAGGATCTAACCAATTCAGTGGTAATATCCCAATTGAAGTATGTCAATTTTATTCTCTCAAGATATTGGATCTTTCAAATAATAAATTATCAGGGTCAATACCTAACTGTTTGCACAATATGACAAGTATGATTTCTCCATATGCTTCAATGGATGTGTTCAAGATTCTTACCCGCACAAAATATTCCAAAAGAGGTTTCAGTTTTGTATACTTTAGGGTAGTTACAAAATATATGGTATTAGATTTTGTACATTCAATATGCCTTGTTGATCTTTCAAGCAACGAATTCTTTGGAACAATACCATCAGGGTTATTTATGCTCATTGGATTGCAATCTTTAAATCTGTCTCACAATCAATTAATGGGATCGATTTCACAACATGCAAAATCCCATTGGGAACACAACTTGAGAGTTTCACAAACTTTAGCTATGTTGGAAATCCAAAACTTTGTGGACCTCCACTCACAAAACTTTGCCAACAAGATGAGAAACTACCAAATGAAAATCAGAAGAGAGAAGAAGATGATGATGATGATGATAGCTATGAAGTATGTTCATGGTTTTTTATGGGGTGGGAATTGGATTTGCCACAAGCTTTTGGGGAGTATTGGGTGCTATTCTTTTCAACAGAAAAAGACATGGTATTTCAGATTTTTAAATATATTCTATGACATTCTGATCCGCTGCTTCCATAGTCCTTATTGGAGTGAATATTGCTTTGGCTAA 2601 0.3406 MPHVLINSHHPLPKLQNISYCATNSMATSFSNQITIILFCLLSTIIFNSSSLVMCNSMIIHCDKKDENTLLKFKHEVTDPSGVLSSWSSDEEKDCCQWRGVHCDNITHRVIELHLPCDTIQSDEILDKDNAKPHCLTGEFDMSSLFDLEFLSYLDLSNNDFKTIKYDFNSIHNNKTCNDSSNIHYLDLAYNYHLFSDYNNMLHQISHLFSSLQFLDLSGIDFYKETDWLQSLTSLSSLLELHLDDCSLKDINPSLQYANLTSLKVLSLVSNDFSTILPSWLFNLSHISYIDLSENYLHGQLPQTLPKFHQSIESLCLYTNDLDGPIPDWLGQLDQLKALALSYNNFDGQISTILENLPSLLIELRLHSNFLTGTVSEKNFHLLSKLKNLGLGSEYLVFDFDTKWIPSFQLQILVLENVGPKFPSWIYTQSSLELLFIWNSRVSFEPLGKFWKFAAQLEALALVNNSINADISNVLLDSKVVIMQLNNFRGSVPQVSSKVTFLDLSYNNLSDISPFLCQKMKGKRNLETLFISDNALSGEIPNCLMNWTSLLQVDLRNNNLTGKIPHSIGSLSRLIFFSLEKNKLFGEIPLSLKDCKNLQYLILGGNAFSGTIPSWINQRIKILQLGSNQFSGNIPIEVCQFYSLKILDLSNNKLSGSIPNCLHNMTSMISPYASMDVFKILTRTKYSKRGFSFVYFRVVTKYMVLDFVHSICLVDLSSNEFFGTIPSGLFMLIGLQSLNLSHNQLMGSISQHAKSHWEHNLRVSQTLAMLEIQNFVDLHSQNFANKMRNYQMKIRREKKMMMMMIAMKYVHGFLWGGNWICHKLLGSIGCYSFQQKKTWYFRFLNIFYDILIRCFHSPYWSEYCFG 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00220 866 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 425 679 - -
Arst9g00220 866 SUPERFAMILY L domain-like 477 749 - -
Arst9g00220 866 Gene3D Ribonuclease Inhibitor 63 379 IPR032675 -
Arst9g00220 866 ProSiteProfiles Leucine-rich repeat profile. 498 519 IPR001611 GO:0005515
Arst9g00220 866 SMART LRR_typ_2 497 519 IPR003591 -
Arst9g00220 866 SMART LRR_typ_2 148 170 IPR003591 -
Arst9g00220 866 SMART LRR_typ_2 235 257 IPR003591 -
Arst9g00220 866 SMART LRR_typ_2 732 756 IPR003591 -
Arst9g00220 866 SMART LRR_typ_2 641 664 IPR003591 -
Arst9g00220 866 SMART LRR_typ_2 260 284 IPR003591 -
Arst9g00220 866 ProSiteProfiles Leucine-rich repeat profile. 643 665 IPR001611 GO:0005515
Arst9g00220 866 Gene3D Ribonuclease Inhibitor 380 786 IPR032675 -
Arst9g00220 866 Pfam Leucine rich repeat N-terminal domain 64 104 IPR013210 -
Arst9g00220 866 PRINTS Leucine-rich repeat signature 732 745 - -
Arst9g00220 866 PRINTS Leucine-rich repeat signature 644 657 - -
Arst9g00220 866 PANTHER UNNAMED PRODUCT 39 668 - -
Arst9g00220 866 SUPERFAMILY RNI-like 136 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00220 Arst-Chr9 1803635 1806936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00220 251 755 Receptor kinase-like Gene Family AT3G47570 28.519 8.43e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00220 - - aip:107619454 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00220 9 1803635 1806936 Arst9g00220 9 1803635 1806936 ECH