Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00184 ATGTTATCCGGGTCGGGTTCATCGGTGATGTGGTTTCGGAAAGGTCTTCGGATCCACGACAACCCGGCGCTACAACTTGCTTCACAAGGCGCGTCTCATCTCTACCCGCTATTCGTGGTGGACCCGCATTATATGGAGCCTGACCCGACCTCATTCTCGCCCGGTTCGTCGCGCGCGGGTCTTAACCGCACCAAGTTCTTGCTGGAGAGTCTTGTGGACTTGGATCTCAGCCTCAAGAACCTTGGCTCGCGTTTATTGGTTCTTAAGGGTGACCCTGCCGAAGTTCTCATTCGCTGCTTGAAGGAGTGGAACGTCAGAAAGCTATGTTTTGAGTATGACACTGAGCCATATTATCAGGCTCTAGATACTAAAGTAAAGAACTTTGCACTTGGAGCTGGGATTGAGGTTTTCTCTCCTGTGAGTCACACACTCTTCAATCCCACAGAAATTATAGAGAGGAACGGAGGGAAGCCACCACTTACTTATCAATCATTCACCAAAATTGCGGGGCAACCACCGCCACCTCTCACAATCACACACTCTTCGCTTCCTCCCATTGGTATTCTTGGGAGCTGTGATATTTCTGAGGTTCCTACAATCGAAGACCTTGGATATGGAGATGCTAAACAGGATGAATTCTCTCCTTTCAAAGGCGGTGAATCGGAAGCGTTGAAGAGGCTGGCAGAATGCATGAAAGACAAGGCATGGGTCGCAAAGTTTGAGAAACCAAAGGGTAATCCATCTGCATTTCTTAAGCCCGCAACAACTGTTTTATCACCTTACTTAAAATTTGGTTGTCTTTCCTCCAGATATTTCTACCGGCAGATTCAAGATGTCTATGAAACCATGCCGAAGCATACATCACCACCTGTGTCTCTTCTAGGACAGTTATTGTGGAGAGACTTCTTTTACACAGTAGCTTTTGGAACTCCAAACTTTGATAGGATGAAAGACAACAAGATATGCAAACAGATTCCTTGGAAGGATGATGATAAACTGTTAGAGGCTTGGAGGAATGGTCGCACAGGATTTCCATGGATTGATGCTATCATGGTCCAGCTACATCAATGGGGTTGGATGCATCATCTGGCACGTCATTGCGTTGCGTGTTTTCTAACTCGAGGTGATCTGTTTGTTCACTGGGAGAGAGGACGTGATGTCTTTGAGAGGCTTCTGATCGATGCAGATTGGGCTATTAATAATGGAAACTGGTTGTGGCTCTCATGTTCTTCCTTCTTTTATCAGTATAATCGTATTTACTCCCCGACATCCTTTGGTAAGAAGTATGACCCTAATGGTGACTACATTAGACACTTTCTCCCTGTCTTAAAAGATATGCCGAGGCAGTACATATATGAACCATGGAGTGCTCCTCTAAGCATTCAGACCAAAGCAAATTGCATTATTGGCAAAGACTACCCAAAGCCAGTTGTTTTGCATGATTCTGCGAGTAAAGAGTGCAAAAGGAAAATGGGCGAGGCGTATGCACTGAGCAAAGAACTGGATGGTGTTGTTAATGAAGATGATCTGAAAAACTTGAGAAGGAAACTAGACGAGGGTAAAGAACAAGAGACTAAAGCCAAGAGACCTAGAAACACAAGAGGGGACACCATCTTTGTAATTTTATAG 1629 0.4518 MLSGSGSSVMWFRKGLRIHDNPALQLASQGASHLYPLFVVDPHYMEPDPTSFSPGSSRAGLNRTKFLLESLVDLDLSLKNLGSRLLVLKGDPAEVLIRCLKEWNVRKLCFEYDTEPYYQALDTKVKNFALGAGIEVFSPVSHTLFNPTEIIERNGGKPPLTYQSFTKIAGQPPPPLTITHSSLPPIGILGSCDISEVPTIEDLGYGDAKQDEFSPFKGGESEALKRLAECMKDKAWVAKFEKPKGNPSAFLKPATTVLSPYLKFGCLSSRYFYRQIQDVYETMPKHTSPPVSLLGQLLWRDFFYTVAFGTPNFDRMKDNKICKQIPWKDDDKLLEAWRNGRTGFPWIDAIMVQLHQWGWMHHLARHCVACFLTRGDLFVHWERGRDVFERLLIDADWAINNGNWLWLSCSSFFYQYNRIYSPTSFGKKYDPNGDYIRHFLPVLKDMPRQYIYEPWSAPLSIQTKANCIIGKDYPKPVVLHDSASKECKRKMGEAYALSKELDGVVNEDDLKNLRRKLDEGKEQETKAKRPRNTRGDTIFVIL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00184 542 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 207 495 IPR036134 -
Arst9g00184 542 MobiDBLite consensus disorder prediction 516 536 - -
Arst9g00184 542 Pfam FAD binding domain of DNA photolyase 295 491 IPR005101 -
Arst9g00184 542 Gene3D - 142 183 - -
Arst9g00184 542 Gene3D - 194 310 - -
Arst9g00184 542 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 6 144 IPR006050 -
Arst9g00184 542 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 311 535 - -
Arst9g00184 542 FunFam Cryptochrome-1 311 532 - -
Arst9g00184 542 PANTHER CRYPTOCHROME 7 497 IPR002081 -
Arst9g00184 542 MobiDBLite consensus disorder prediction 516 533 - -
Arst9g00184 542 Pfam DNA photolyase 8 169 IPR006050 -
Arst9g00184 542 Gene3D HUPs 5 141 IPR014729 -
Arst9g00184 542 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 184 IPR036155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00184 Arst-Chr9 1348969 1353639 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00184 K02295 - gmx:100780347 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00184 9 1348969 1353639 Arst9g00184 9 1348969 1353639 ECH