LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g00183	ATGTGGCGGAGGCTACTCTCTTCTAACCTCAAATCCCTAATTTCCCATTCTGCCCCTCTTTCATCTACCACTCCCCGATCNTCTGCTTCCGCCGCCGCCAGATTCGCCACTGCCGCCACCGCTTCCCACTCCTCCACCCTCCTTTCCCGCCACTTCTCCACCCAATCTGATGATGGTAAAGCAGTGAAGAAGACTGTTCAGGATGTAATGCCAATTGCTACTGGGCACGAAGCTGAGGAGATTCAGGCTGATCTTGAGGGGAGGGATATCCTTGAAATAGATCATCCTGAAGGTCCTTTCGGTACAAAGGAAACACCAGCTGTTGTTAAATCTTACTATGATAGAAGGATAGTTGGATGCCCAGGAGGTGAAGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTCATGAATGCCCAGTTTGCTCTCAGTACTTTGTGCTTGAAGTGGTGGGACCTGGCGGAGATCCTTACGGACACGGGGACGACGAACACCACCATTAA	519	0.5106	MWRRLLSSNLKSLISHSAPLSSTTPRSSASAAARFATAATASHSSTLLSRHFSTQSDDGKAVKKTVQDVMPIATGHEAEEIQADLEGRDILEIDHPEGPFGTKETPAVVKSYYDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGDPYGHGDDEHHH	172

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst9g00183	172	Gene3D	Cytochrome c oxidase, subunit Vb	62	156	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Arst9g00183	172	CDD	Cyt_c_Oxidase_Vb	61	158	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Arst9g00183	172	Pfam	Cytochrome c oxidase subunit Vb	70	161	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Arst9g00183	172	FunFam	Cytochrome c oxidase subunit Vb	62	156	-	-
	Arst9g00183	172	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	171	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Arst9g00183	172	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	61	160	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Arst9g00183	172	SUPERFAMILY	Rubredoxin-like	61	159	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g00183	Arst-Chr9	1344650	1348681	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst9g00183	K02265		-	gmx:100819356	211.846

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst9g00183	9	1344650	1348681	Arst7g03207	7	78085687	78088538	ECH
	Arst9g00183	9	1344650	1348681	Arst9g00183	9	1344650	1348681	ECH
	Arst7g03207	7	78085687	78088538	Arst9g00183	9	1344650	1348681	PCT