Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00179 ATGAGCAGACCAGGGGACTGGAACTGCAGGTCATGCCAGCATTTGAACTTCCAAAGGCGGGATTCGTGCCAGCGATGCGGCGACTCGAAATACGGCGACAGAGTCGTCGATTTCGGGGGTTTTGGAGGAGGAGGAGGAGGAGGTAGAGGATCTTCATTTGGAATGATGACCGGTTCCGATGTTCGCCCCGGCGACTGGTACTGCGCCGCAGGTAACTGCGGTGCACACAACTTTGCTAGCCGCTCTAGCTGCTTTAAGTGCGGTGCATTCAAGGATGACTTGGCTGGCGCCTTCAACAGCGAATTCTCGCGCTCGAGATATGGTGGCGGCGGTGGCGGCGGCGGTAGACCTGGATGGAAATCCGGTGATTGGATATGTAGCAGATCAGGATGCAATGAACACAACTTTGCTAGCAGACTTGAATGTTTCAAATGCAGTGCTCCAAGGGACTACTAG 456 0.5482 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVVDFGGFGGGGGGGRGSSFGMMTGSDVRPGDWYCAAGNCGAHNFASRSSCFKCGAFKDDLAGAFNSEFSRSRYGGGGGGGGRPGWKSGDWICSRSGCNEHNFASRLECFKCSAPRDY 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00179 151 ProSitePatterns Zinc finger RanBP2-type signature. 124 145 IPR001876 -
Arst9g00179 151 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
Arst9g00179 151 FunFam Ran-binding zinc finger protein 113 151 - -
Arst9g00179 151 SUPERFAMILY Ran binding protein zinc finger-like 112 150 IPR036443 -
Arst9g00179 151 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Arst9g00179 151 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Arst9g00179 151 Gene3D - 57 93 - -
Arst9g00179 151 Gene3D - 2 32 - -
Arst9g00179 151 Gene3D - 116 150 - -
Arst9g00179 151 FunFam Ran-binding zinc finger protein 56 93 - -
Arst9g00179 151 SUPERFAMILY Ran binding protein zinc finger-like 59 92 IPR036443 -
Arst9g00179 151 ProSitePatterns Zinc finger RanBP2-type signature. 66 87 IPR001876 -
Arst9g00179 151 ProSiteProfiles Zinc finger RanBP2 type profile. 120 151 IPR001876 -
Arst9g00179 151 PANTHER ZINC FINGER PROTEIN 59 150 - -
Arst9g00179 151 SMART zf_4 5 29 IPR001876 -
Arst9g00179 151 SMART zf_4 64 90 IPR001876 -
Arst9g00179 151 SMART zf_4 122 148 IPR001876 -
Arst9g00179 151 ProSiteProfiles Zinc finger RanBP2 type profile. 62 93 IPR001876 -
Arst9g00179 151 Pfam Zn-finger in Ran binding protein and others 62 89 IPR001876 -
Arst9g00179 151 Pfam Zn-finger in Ran binding protein and others 120 149 IPR001876 -
Arst9g00179 151 Pfam Zn-finger in Ran binding protein and others 3 28 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00179 Arst-Chr9 1299469 1301128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00179 - - qsa:O6P43_018051 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00179 9 1299469 1301128 Arst9g00179 9 1299469 1301128 ECH