Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00149 ATGGGGGGAGCGTGTTCTAGGAAGCCCGAGCGGGATTACGAAGATAGTCCATGTAGAGGACTTTCACGAAGATTTTGCAAAAGTGGGAGTTTGAAATGGTGGACATCCTCGTTCGCTTATCCATCAGTAGATTTCCATTTACGGAAAGGGGATTGTCCATCGCTGTTGGAGTTGTGCATCAAGAAAATAAATGAGGATATTGATAGATATAATACATTTTCTATGCTGCCTCGGGATATAAGTCAGCAAATTTTTAATAAATTGGTTTGTTCCCAACGCCTAACCAGCGTTTCCCTTGAAGCTTTTCGAGATTGTGCGCTTCAGGACCTTGACTTGGGAGAATATGCCGGTGTTAATGATTCTTGGATGGATGTCATCTCATCACAGGGTTCATCATTACTTTCCGTGGATCTTTCTGGGTCTGAGGTCACTGATTTTGGGCTGAGTTACCTAAAATATTGTGAAAATCTCCTTTCCTTAAATCTAAATTACTGTGATCAAATCTCGGATCATGGACTGGAGTGCATCAGTGGTCTGTCAAACTTGACAAGTTTGAGCCTCAGAAGAAATGATTCAATATCTGCTCAAGGAATGAGTATCTTGTCTGGTCTTGTTAATTTAGTCAAGTTGGACTTGGAGAGATGTCCTGGGATTCATGGAGGCCTGGTTCACATTCAAGGTTTAACCAAGTTGCAATCACTCAATATTAAATGGTGCAATTGCATAACCGATTCTGATATGAAGCCTCTATCAGAGTTGGTGTGTTTGGAGAGTCTTGAGATTTCTTGCAGTAAAGTCACTAATTTTGGCATCAGCTTTCTAAAAGGATTGCAAAAGCTTTCCTTACTAAACTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGATCTTCCTCTCTTGTCAAACTTGAATCTTAATAGATGCAATATTACCGATGACGGCTGTGAAAAGTTTTCACGGCTGGAAAATTTGAAAGTACTCAACTTGGGATTTAATGACATTACTGATGCATGTTTAGCACACTTGAAAGCAGTATTGACAAAGTTGGAGAGCTTGAACCTTGATTCATGTAGGATTGGTGATGAAGGGTTGATCAACTTGGCAGGCCATAGGCAACTGAAGTGCTTGGTATTGTCTGATACAGAAGTTGGAGATACTGGGTTACACCATTTGTCAGAATTTAAGAACCTGAGGTCCTTGGAGATATGTGGTGGAGGATTGACTGATGCCGGTGTGAAAAATATTAGAGCGCTTTCTTGTCTTATGTGCCTAAACTTATCACAAAACTGCAACCTTACGGACAAAAGCCTGGAATCAATTTCAGGGCTTACTCGATTAATCTCTTTGAATGTTTCAAATTCTCGCATCACCAACTCTGGTCTGCAGCATTTGAGAACACTGAAGAACTTGAGGTCTCTGACATTGGAATCCTGCAAGGTGACAGCATATGACATAAAGAAACTAAGATCAACACACCTCCCGAATCTGGTCAGCTTCCGGCCAGAATAG 1521 0.4129 MGGACSRKPERDYEDSPCRGLSRRFCKSGSLKWWTSSFAYPSVDFHLRKGDCPSLLELCIKKINEDIDRYNTFSMLPRDISQQIFNKLVCSQRLTSVSLEAFRDCALQDLDLGEYAGVNDSWMDVISSQGSSLLSVDLSGSEVTDFGLSYLKYCENLLSLNLNYCDQISDHGLECISGLSNLTSLSLRRNDSISAQGMSILSGLVNLVKLDLERCPGIHGGLVHIQGLTKLQSLNIKWCNCITDSDMKPLSELVCLESLEISCSKVTNFGISFLKGLQKLSLLNLEGCLVTAACLDSLADLPLLSNLNLNRCNITDDGCEKFSRLENLKVLNLGFNDITDACLAHLKAVLTKLESLNLDSCRIGDEGLINLAGHRQLKCLVLSDTEVGDTGLHHLSEFKNLRSLEICGGGLTDAGVKNIRALSCLMCLNLSQNCNLTDKSLESISGLTRLISLNVSNSRITNSGLQHLRTLKNLRSLTLESCKVTAYDIKKLRSTHLPNLVSFRPE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00149 506 FunFam Predicted protein 118 219 - -
Arst9g00149 506 SUPERFAMILY L domain-like 122 438 - -
Arst9g00149 506 SMART LRR_CC_2 447 471 IPR006553 -
Arst9g00149 506 SMART LRR_CC_2 228 253 IPR006553 -
Arst9g00149 506 SMART LRR_CC_2 154 179 IPR006553 -
Arst9g00149 506 SMART LRR_CC_2 180 204 IPR006553 -
Arst9g00149 506 SMART LRR_CC_2 301 325 IPR006553 -
Arst9g00149 506 SMART LRR_CC_2 350 374 IPR006553 -
Arst9g00149 506 SMART LRR_CC_2 398 422 IPR006553 -
Arst9g00149 506 PANTHER UNCHARACTERIZED 30 250 - -
Arst9g00149 506 FunFam Leucine-rich repeat family protein 403 502 - -
Arst9g00149 506 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Arst9g00149 506 Pfam Leucine Rich repeat 180 199 IPR001611 GO:0005515
Arst9g00149 506 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Arst9g00149 506 Gene3D Ribonuclease Inhibitor 299 373 IPR032675 -
Arst9g00149 506 ProSiteProfiles Leucine-rich repeat profile. 327 347 IPR001611 GO:0005515
Arst9g00149 506 Pfam Leucine rich repeat 303 363 IPR001611 GO:0005515
Arst9g00149 506 Pfam Leucine rich repeat 400 460 IPR001611 GO:0005515
Arst9g00149 506 Gene3D Ribonuclease Inhibitor 374 504 IPR032675 -
Arst9g00149 506 Gene3D Ribonuclease Inhibitor 124 219 IPR032675 -
Arst9g00149 506 Gene3D Ribonuclease Inhibitor 220 292 IPR032675 -
Arst9g00149 506 FunFam Leucine-rich repeat family protein 220 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00149 Arst-Chr9 1031530 1040010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00149 98 497 Receptor kinase-like Gene Family AT2G15080 26.988 1.11e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00149 - - gmx:100800666 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00149 9 1031530 1040010 Arst9g00149 9 1031530 1040010 ECH