Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00131 ATGGCCCTTCTTCTTCTTCTTCAACTCAGGACCAAACCCAACAACAACCCTTTCACAAACCCGACTTTGTTCTTTTTATTCTCCAAATATTTTTCTTCTTCTTCTTCTTCTTCTCTCAGGGACCTTAAACACACTCTCAAACACCAACAACCACAATCACAATCACAATCACAATATCCTTCAACACCCTCAGAGCAATCCTCATTCACCAACACTCATTATCATCAGCAGCAACAGCAAAAGCAACATCAGCAACAACAGAAGAACTCTCTCCACGATATCCGTCAAACCCTCTCCGAGTTTCGCCGCCGCACCGCCGTCGAATCCCCGCCGGCCGAACCGCTTTCATTCAGTGATATCTACGACCGAACCATGTGCCGGAAAACGCCCTTTCCGGACGTGGAATCCTCCGGTACGGCGCACGGAGGAGGGAGGAGACCTTTCAACCTCGGCGCCGTTCGCGATGGCTTGCGGAAGCCAGGAGAAGCTCGCGCCAGAGACCGGAGGAGAGCTGATTCGATGTCGTTGGAGGCGTACAGGGAGGTGCTGAGATCGAGGCCGTTAGATTCCTCCGCCACCGCAGCAGCTGGAGCATCCTCGCCGGAGAATGTGGTTGGCACTGCGAGCTCGTTGCCGGATTCTGTGTTGAAGCAGAAGAGACGCAAAGAAGAATCCGAGTTTATGAAGGTTTATAGCTTTGGCGAATTGGGGGAGAAATTGAAGAAGTTGAGACCTGAGGGAATGAGAAAAGAGTGGTTCTCTATTGAAGAATTGAACGAGAGGTTGAAGAGGATGAGAGAGAAGGAGGTGGAGGAAGCTGAGTCCAATGTCACAGGAGAGGTACTATTCAAGGACATGAGAGAGTGCCTGCTATCTGAAGATGAAAAGTCTAGGAAGAGTTCACTGCAGAAATCTGATATCTTAAGCCAGTTCATTGGGACTCCAGCCTACTATTCGGGTCCCCCTAAAGAGCAGCTTGTTGAAAAATACTTCCATCCAGATAATATGTCCTCAGAAGAAAAGTTGAAAATTGAACTTGCAAAGGTTAGAGATGAGTTCAAAATGTCAGAGTCAGACTGTGGATCTGCTCGAGTTCAAGTTGCACAACTCACAACTAAGATTAAGCATCTATCAGCTGTTCTACACAAGAAGGATGTGCATTCTCGTAAAGGCTTGATAGCAATGGTTCAGAGGAGAAAAAGATTATTGAAATACCTCAGAAGAAGTGATTGGGAATCTTATTGTTTCGTTATATCTAAGCTAGGTCTACGTGATAATCCAGATCATGGTCGCAAAACATAG 1302 0.4693 MALLLLLQLRTKPNNNPFTNPTLFFLFSKYFSSSSSSSLRDLKHTLKHQQPQSQSQSQYPSTPSEQSSFTNTHYHQQQQQKQHQQQQKNSLHDIRQTLSEFRRRTAVESPPAEPLSFSDIYDRTMCRKTPFPDVESSGTAHGGGRRPFNLGAVRDGLRKPGEARARDRRRADSMSLEAYREVLRSRPLDSSATAAAGASSPENVVGTASSLPDSVLKQKRRKEESEFMKVYSFGELGEKLKKLRPEGMRKEWFSIEELNERLKRMREKEVEEAESNVTGEVLFKDMRECLLSEDEKSRKSSLQKSDILSQFIGTPAYYSGPPKEQLVEKYFHPDNMSSEEKLKIELAKVRDEFKMSESDCGSARVQVAQLTTKIKHLSAVLHKKDVHSRKGLIAMVQRRKRLLKYLRRSDWESYCFVISKLGLRDNPDHGRKT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00131 433 CDD Ribosomal_S15p_S13e 348 422 IPR000589 GO:0003735|GO:0005840|GO:0006412
Arst9g00131 433 MobiDBLite consensus disorder prediction 48 91 - -
Arst9g00131 433 MobiDBLite consensus disorder prediction 42 91 - -
Arst9g00131 433 Hamap 30S ribosomal protein S15 [rpsO]. 336 425 IPR005290 GO:0003735|GO:0005840|GO:0006412
Arst9g00131 433 NCBIfam 30S ribosomal protein S15 347 424 IPR005290 GO:0003735|GO:0005840|GO:0006412
Arst9g00131 433 Coils Coil 255 275 - -
Arst9g00131 433 MobiDBLite consensus disorder prediction 132 155 - -
Arst9g00131 433 Pfam Ribosomal protein S15 348 424 IPR000589 GO:0003735|GO:0005840|GO:0006412
Arst9g00131 433 SMART Ribosomal_S15_2 346 424 IPR000589 GO:0003735|GO:0005840|GO:0006412
Arst9g00131 433 PANTHER S15/NS1, RNA-BINDING PROTEIN 10 429 - -
Arst9g00131 433 Gene3D - 391 426 - -
Arst9g00131 433 MobiDBLite consensus disorder prediction 188 219 - -
Arst9g00131 433 MobiDBLite consensus disorder prediction 192 214 - -
Arst9g00131 433 Gene3D - 340 389 - -
Arst9g00131 433 SUPERFAMILY S15/NS1 RNA-binding domain 346 425 IPR009068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00131 Arst-Chr9 875895 879543 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00131 - - ahf:112709767 754.977