Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03974 GGCAGAAACGATATTCTCACTTGGATCAACAACCGCCTTCAACTTAACCTCTCTCGCATTGAGGAAGCTGCATCTGGAGCTGTACAATGTCAGATAATGGATATGACATATCCAGGGGTTGTTCCAATGCACAAGGTGAATTTTGACGCAAAGACAGAATATGATATGATTCAGAATTACAAAATTCTGCAGGAAGTGTTCAACAAGCTGAAAATTGATAAACATATTGAAGTTAACAGGCTAGTTAAAGGTCGACCTTTGGACAACTTAGAGTTTCTACAATGGCTGAAACGATACTGCGATTCTGTGAATGGCGGCATTATGAATGAGAATTATAATCCTGTGGAGCGTAGGTGTAAGGGTGGAAAGGGTGGAAATTCTAAAATTCTGAAGAGCTCAAAATACCTACAAACAAGTGCTATCTATAATGCTGGTTCAGGCGATATGCTGGGTCCCAATAGAATCTCTGTTCCCAAGCAATCAAAGTCAAGCAGAGGAGCAGGTGGGCCTAATTCTTCAGAAATTGAAGCATTGTCTAAGCAGGTTACTGATCTCAATCTCTCGATGGATCTCTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAACTAAGGGATATAGAAATTCTTTGTCAAGCTGCCGAAGTGGAGAATGATCCTATGTCTGTAGCAATTAGGAAGATTTTGTATGCTACTGATACAAAGGAATCAGCACTAGATGAAGCCCAGGATTACCTTAACGAAAACTTCAATGCTGCTGACGATGAAGAGGAAGCTGAAGCTGCAGATGAAGAAGCTGCAGCTAAGGAAGAAACCAAAGCCTGA 822 0.4075 MATSIGIMDSAYFVGRNDILTWINNRLQLNLSRIEEAASGAVQCQIMDMTYPGVVPMHKVNFDAKTEYDMIQNYKILQEVFNKLKIDKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKGGNSKILKSSKYLQTSAIYNAGSGDMLGPNRISVPKQSKSSRGAGGPNSSEIEALSKQVTDLNLSMDLLEKERDFYFAKLRDIEILCQAAEVENDPMSVAIRKILYATDTKESALDEAQDYLNENFNAADDEEEAEAADEEAAAKEETKA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03974 287 MobiDBLite consensus disorder prediction 266 287 - -
Arst8g03974 287 Gene3D - 183 251 - -
Arst8g03974 287 FunFam Microtubule-associated protein RP/EB family member 1B 187 262 - -
Arst8g03974 287 FunFam RP/EB family microtubule-associated protein 6 134 - -
Arst8g03974 287 MobiDBLite consensus disorder prediction 166 188 - -
Arst8g03974 287 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Arst8g03974 287 Gene3D - 6 134 IPR036872 -
Arst8g03974 287 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Arst8g03974 287 Pfam EB1-like C-terminal motif 206 244 IPR004953 GO:0008017
Arst8g03974 287 SUPERFAMILY EB1 dimerisation domain-like 188 247 IPR036133 GO:0008017
Arst8g03974 287 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 6 269 IPR027328 GO:0008017
Arst8g03974 287 Coils Coil 265 285 - -
Arst8g03974 287 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 181 251 IPR004953 GO:0008017
Arst8g03974 287 Coils Coil 189 209 - -
Arst8g03974 287 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
Arst8g03974 287 MobiDBLite consensus disorder prediction 170 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03974 Arst-Chr8 49929001 49932989 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03974 K10436 - gmx:100809691 419.083