Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03948 ATGAGTGCGGTGTTTGAAGGTTACGAGCGTCAATACTGTGAGCTGTCTTCAAATCTGTCAAGACAATGCAGTGCAGCCTCTTCTCTTGATGGAGGTAAGCAGAAGAAGCAGAAAATTTCTGAAATAAAAGCTGGAATGGATGATGGTGATACATTGATTCGAAAAATGGAGCTTGAAGCTAGGAGTTTGCAAGCAAGCATGAAGGCATCTCTTCTTGTCAAGTTAAAGGAATACAAAACCGATTTGAACAACTTGAAAAGTGAGCTTAAAAGAATCACATCGGCTGCTAATAATAATAAAGATGAGTTGTTGGAATTGGGACAGGCTGATACATTGGCGGTGTCATCAAACGATCACAGAGGAAGACTGGTGATGTCTACAGAGAGATTGAATCAGTCGTCTGAAAGAATAAAGGAGAGCAGGAGAAGCATGCTGGAAACAGAGGAGCTTGGCGCCGCCATCCTCCAAGATTTGCATCAACAACGCCAGTCACTACTTCATGCCCACAACACGCTTCATGGAGTGGATGATAACATCGACAAAAGCAAGAAGATTTTGACAGCTATCTCAAGAAGGATGAGTAGGAATAAATGGATTCTTGGCTCCTTCATGGCGGCCATAGTCCTTGCAATTATAGTTATCTTAACCATTAAAGTCTCTCGTTAG 666 0.4219 MSAVFEGYERQYCELSSNLSRQCSAASSLDGGKQKKQKISEIKAGMDDGDTLIRKMELEARSLQASMKASLLVKLKEYKTDLNNLKSELKRITSAANNNKDELLELGQADTLAVSSNDHRGRLVMSTERLNQSSERIKESRRSMLETEELGAAILQDLHQQRQSLLHAHNTLHGVDDNIDKSKKILTAISRRMSRNKWILGSFMAAIVLAIIVILTIKVSR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03948 221 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 9 216 - -
Arst8g03948 221 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 1 100 - -
Arst8g03948 221 Coils Coil 68 102 - -
Arst8g03948 221 SUPERFAMILY t-snare proteins 6 94 IPR010989 GO:0016020|GO:0016192
Arst8g03948 221 CDD SNARE_Vti1 127 187 - -
Arst8g03948 221 FunFam Vesicle transport through interaction with t-SNAREsB 117 197 - -
Arst8g03948 221 Pfam Snare region anchored in the vesicle membrane C-terminus 128 193 - -
Arst8g03948 221 Pfam Vesicle transport v-SNARE protein N-terminus 12 91 IPR007705 GO:0006886|GO:0016020
Arst8g03948 221 PIRSF Membrin-2 1 219 IPR027027 GO:0005484|GO:0005794|GO:0016192
Arst8g03948 221 Gene3D - 117 197 - -
Arst8g03948 221 SUPERFAMILY SNARE fusion complex 130 188 - -
Arst8g03948 221 Gene3D - 1 100 IPR038407 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03948 Arst-Chr8 49663004 49664040 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03948 K08493 - gmx:100801744 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03948 8 49663004 49664040 Arst8g03948 8 49663004 49664040 ECH