Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03870 ATGGCACCGCACGATCTCCGCCGTCCATTCAAACGACCGTTGATCTCTGATCAAGAGAAGCGCAGGCAGCAGTCCCTGCTCCGGCAGGCACAGAATCGACGCGACGCCCAGAACCATGCTCGATTCCTCGCCTCCACCGCCTTATCGCTCGAACAACCGCACGAACTCGAACCCGAACCCGAACCCGAACTTCACGACGAACTTATACCTGACTCCGAAGTTCCCGAGTCACCGAAGGAGCTTGACGTGGTTGAAGCGTCGAAGCTGAAAGGCGCGGAGGCTCGGAAATGGTTCGCGAAACAGCTGATGCATCCCGAATGGATGATCGACATTCCCGAAAATCTCTCACAAGACTGGTTTGTGTTTGCTAGACCTTCTGGAAAACGATGCTTTGTGGTTTCGTGCAACGGCACGACGATAAGTCGTTTAAGGAACGGTTCGATACTGCACCGTTTTCCGTCCGAGTTGCCGAATGGTGCGAGAAGAAAGGATTCCTCTGGTCCTGCTCAGTCTTACTCCATTTTGGATTGCATTTTTCACGAGGTGGATCAGACTTACTATGTGATTGACATGGTTTGCTGGCGGGGCTACTCGCTTTATGATTGCGCTGCAGAATTTAGGTTTTTCTGGTTGAATTCCAAGCTTGCTGAGACTGGCGCTTGTGAACCTCCCTCGCATTATCACAAGTACAGGTTCAGTTTGGTTCCAGTGTACTGCTGCGACCAGAGTGGATTATGTGCCGCTTATACTGGATCTGTGCCTTATGTCAAAGATGGTCTTCTGTTTTATAACAAGCATGCACACTATCAGACAGGAATTACACCACTAGCATTGGTTTGGAAGGATGAGAACTGCAGTCAGTATGTCATGGACACAGATAGCAAAGGACAGGTTCCAAATCATCAGCAGGTGGTTTTGGAGCTACAAGAAGGTGGAAAGCTGTGCACTTCCGATGATCCTCCTGTAGTATTTGGATGTTTAGATGCAGGCTTTATGCATGAGTCAGAGTTGCATTCAGGATGTCTTGTACGGTTTGCAATTGGAGAAGGGGGACTGGTTTTGGTGGATGGAAAACTTGAGAAAGCTGATCTAAATTATCTAGGCAAGGCCAACCGTGCTCGTGCTTCTGCTGATAGTTTCTCTAAGATTGTGTTCCAATACAGTGTTCGACACTCTCCTCTAAGAATTGATGATTTGTTAGGATCTGTCAACTCAGCAGCTGATGAAAGTAACAAAGTTTGTGATGTTGAAATGGATGGTTGA 1263 0.4814 MAPHDLRRPFKRPLISDQEKRRQQSLLRQAQNRRDAQNHARFLASTALSLEQPHELEPEPEPELHDELIPDSEVPESPKELDVVEASKLKGAEARKWFAKQLMHPEWMIDIPENLSQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILHRFPSELPNGARRKDSSGPAQSYSILDCIFHEVDQTYYVIDMVCWRGYSLYDCAAEFRFFWLNSKLAETGACEPPSHYHKYRFSLVPVYCCDQSGLCAAYTGSVPYVKDGLLFYNKHAHYQTGITPLALVWKDENCSQYVMDTDSKGQVPNHQQVVLELQEGGKLCTSDDPPVVFGCLDAGFMHESELHSGCLVRFAIGEGGLVLVDGKLEKADLNYLGKANRARASADSFSKIVFQYSVRHSPLRIDDLLGSVNSAADESNKVCDVEMDG 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03870 420 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 98 281 - -
Arst8g03870 420 MobiDBLite consensus disorder prediction 54 78 - -
Arst8g03870 420 MobiDBLite consensus disorder prediction 29 45 - -
Arst8g03870 420 MobiDBLite consensus disorder prediction 1 28 - -
Arst8g03870 420 CDD Snurportin-1_C 97 283 - -
Arst8g03870 420 Gene3D DNA ligase/mRNA capping enzyme 2 307 - -
Arst8g03870 420 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 419 IPR017336 GO:0005634|GO:0005737|GO:0061015
Arst8g03870 420 MobiDBLite consensus disorder prediction 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03870 Arst-Chr8 49132607 49136378 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03870 K13151 - gmx:100801927 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03870 8 49132607 49136378 Arst8g03870 8 49132607 49136378 ECH