Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03602 ATGGAAAAGTGGATGGATTTTGTGATGGTGATGATGGTGTCATTATTGACATTCATTGTTGGAGAAGAAGATGGTGTTACATATGATGGAAGGTCTTTACTCATTCATGGCCAGAGGAAACTCCTCTTCTCTGGCTCTATTCATTATCCTCGAAGTACTCCGAAGATGTGGCCAGATTTGATAGGCAAAGCAAAAGAAGGAGGATTGGATGTTATTCAAACCTATGTGTTTTGGAATTTACACGAGCCTCAACCTGGACAGTATGATTTCAGTGGTAGATATGACTTGGTCAGATTCATAAAGGAAATCCAAGCTCAAGGCTTGTATGTTTGCCTCAGAATTGGACCTTTCATTGAGAGTGAATGGACATACGGGGGATTCCCATTTTGGTTACATGATGTGCCTGGAATTGTTTACCGAACAGACAATGAGCCATTCAAGTTCTACATGCAAAATTTTACAACAAAAATAGTGAACATGATGAAAGCTGAGGGCTTATATGCTTCACAAGGAGGCCCAATTATATTGTCACAGATTGAAAACGAATATCAAAACGTGGAAAGGTCATTCGGTGTGGGAGGACCACAGTATGTTCAATGGGCTGCAAAAATGGCACTGAGCCTTGACACTGGTGTTCCATGGGTTATGTGCAAGCAAACTGATGCTCCTGATCCAGTGATCAATACATGTAATGGCATGAGATGTGGAGAAACCTTTCCAGGCCCAAACTCGCCCAACAAGCCCAAATTATGGACCGAAGACTGGACTTCTTTTTATCAAGTGTATGGTGGGTTGCCATATATAAGATCTGCACAAGACATTGCATTTCACGTCACTCTTTTTATTGCAAGAAATGGAAGCTATGTCAACTATTATATGTACCATGGTGGAACTAACTTTGGGAGAACAGCCTCTGCTTATGTTATAACAGCATATTATGATCAAGCCCCTCTTGATGAATATGGTTTGTTGAGGCAACCTAAGTGGGGACATCTTAGGGAATTGCATGCTGCAATCAAGTCTTGCTCTTCAACTTTGTTGCAAGGAGTTCAAAGTAATTTCTCTTTAGGTAAATTGCAAGAGGGTTATGTTTTTGAAGAAGAACATGGAGGATGTGTTGCATTCCTCATAAACAATGATGGAGTGAATAACACAAATGTCCAATTCCGCAACAAAACCTATGAATTGCTACCTAAGTCAATTAGTATCTTACCAGATTGTCAAAATGTCACATTCAATACAGCAAATGTAAATACAACAAACAACACAAGAATCTATTTTAATAGACAAAACTTCAGCTCAATAGATGATTGGGAGAAATTTGAAGATGTGATTCCAAATTTTGATGACACCCCACTCAGATCAAACACTCTGCTTGAACAAATGAATACAACTAAAGACAAATCAGATTACCTTTGGTACACTACTAGGTTTGAATATAATTTATCTTGTAGCGAACCAACACTTGTTGTTGAGTCCAGGGCACATGTTGCTCATGCTTTTGTCAACACCACATATATAGGTGGAGCACATGGAAATCATGATGTAAAGTCATTCACATTAGAGCTCCCAGTTACAGTGAATGAAGGGACAAACAACCTTTCTATCCTCAGTGTTATGGTTGGACTACCGGATTCAGGGGCATATCTGGAAAAAAGATTTGCTGGCTTAAGGGATGTGGAACTCCAATGTAGTGAACAGGAGTCACTTAGTTTGACCAATTCCACTTGGGCATATCAGGTTGGATTATTGGGAGAGAAATTACAAGTATATAAAGAACAAAATAGCAATGATACTGAATGGACTCCACTGGAAAATATTACCACTCAGATGCTTGTTTGGTATAAGAGTACATTTGAAACACCAGAGGGTGATGACCCTGTTGCATTGGACCTAAGCTCAATGGGTAAAGGTGAAGTTTGGGTTAATGGACAGAGCATTGGTCGCTATTGGATCTTATTCCATGATTCCAAAGGCAACCCTTCACAATCAATGTATCATGTGCCACGGTCTTTCCTTAAAGACAAGTCTGAAAATGTGTTGGTTTTGGTTGAAGAAGGTGGTGGGAATCTCCTCTCCATAACCCTAAACACTGTTGTTGTCGCTAATTTTCATCAATCCAGATCTAAATCCTTTGCTTAA 2142 0.3954 MEKWMDFVMVMMVSLLTFIVGEEDGVTYDGRSLLIHGQRKLLFSGSIHYPRSTPKMWPDLIGKAKEGGLDVIQTYVFWNLHEPQPGQYDFSGRYDLVRFIKEIQAQGLYVCLRIGPFIESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMMKAEGLYASQGGPIILSQIENEYQNVERSFGVGGPQYVQWAAKMALSLDTGVPWVMCKQTDAPDPVINTCNGMRCGETFPGPNSPNKPKLWTEDWTSFYQVYGGLPYIRSAQDIAFHVTLFIARNGSYVNYYMYHGGTNFGRTASAYVITAYYDQAPLDEYGLLRQPKWGHLRELHAAIKSCSSTLLQGVQSNFSLGKLQEGYVFEEEHGGCVAFLINNDGVNNTNVQFRNKTYELLPKSISILPDCQNVTFNTANVNTTNNTRIYFNRQNFSSIDDWEKFEDVIPNFDDTPLRSNTLLEQMNTTKDKSDYLWYTTRFEYNLSCSEPTLVVESRAHVAHAFVNTTYIGGAHGNHDVKSFTLELPVTVNEGTNNLSILSVMVGLPDSGAYLEKRFAGLRDVELQCSEQESLSLTNSTWAYQVGLLGEKLQVYKEQNSNDTEWTPLENITTQMLVWYKSTFETPEGDDPVALDLSSMGKGEVWVNGQSIGRYWILFHDSKGNPSQSMYHVPRSFLKDKSENVLVLVEEGGGNLLSITLNTVVVANFHQSRSKSFA 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03602 713 Pfam Beta-galactosidase jelly roll domain 605 684 IPR025300 -
Arst8g03602 713 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Arst8g03602 713 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Arst8g03602 713 Gene3D - 542 708 - -
Arst8g03602 713 PANTHER BETA-GALACTOSIDASE RELATED 16 704 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 Gene3D Glycosidases 23 343 - -
Arst8g03602 713 FunFam Beta-galactosidase 22 343 - -
Arst8g03602 713 SUPERFAMILY Galactose-binding domain-like 401 563 IPR008979 -
Arst8g03602 713 SUPERFAMILY Galactose-binding domain-like 576 704 IPR008979 -
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 610 624 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 637 653 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Arst8g03602 713 Pfam Glycosyl hydrolases family 35 32 338 IPR031330 -
Arst8g03602 713 Pfam Beta-sandwich domain in beta galactosidase 346 417 IPR041392 -
Arst8g03602 713 FunFam Beta-galactosidase 292 419 - -
Arst8g03602 713 FunFam Beta-galactosidase 579 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03602 Arst-Chr8 46546150 46556881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03602 8 701 Glycoside Hydrolase AT5G63800 63.324 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03602 - - gmx:100818637 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03602 8 46546150 46556881 Arst8g03602 8 46546150 46556881 ECH