Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03601 ATGAAGCTTTGTTTCTTTCTCTGTCTGCTTTGTTCATTCACATTTCTTGCTTTGGGTTCCAATGTCAGCTACGATGGTCGCTCCCTCATCATTGATGGCCAAAGGAAGCTTCTTCTCTCTGCTTCCATTCACTACCCCAGAAGTGTTCCCGCTATGTGGCCAAGTCTTGTTCAAACAGCTAAGGAAGGAGGGATAGATGTCATAGAAACCTATGTTTTCTGGAACGGTCATGAGCTTTCTCCAGGAAATTATTACTTTGGAGGACGATTCGATCTAGTCAAGTTTGTGAAGATTGTCCAGCAGGCTGGAATGTACTTGATTCTTCGGATAGGGCCGTTTGTTGCAGCGGAATGGAATTACGGTGGTGTACCGGTATGGTTGCATTATATTCCGGGCACAGTGTTCCGGACATACAATCAGCCTTTTATGTCTCATATGCAGAACTTTACAACATACATAGTGAATCTTATGAAACAAGAGAAGCTTTTCGCGTCGCAAGGGGGTCCTATCATCTTATCTCAGATAGAAAATGAGTACGGATACTATGAAAATTTTTATAAGGAGGACGGTAAGAAGTATGCAATGTGGGCTGCAAAGATGGCTGTTGCTCAGAATACCGGTGTCCCGTGGATAATGTGCCAGCAATGGGATGCTCCAGATCCTGTGATAGATACCTGTAACTCATTCTATTGTGACCAATTTAAACCTACTTCTCCAAATAGGCCAAAAATTTGGACCGAGAACTGGCCTGGATGGTTCAAAACTTTTGGTGGAAGAAATCCTCACCGGCCAGCTGAAGATGTGGCATATGCAGTTGCTCGTTTCTTCCAGAAAGGTGGAAGTGTGCAAAACTACTACATGTATCATGGAGGAACAAATTTTGGGCGCACAGCAGGTGGTCCATTCATTACTACAAGTTATGACTACGATGCCCCGATAGATGAGTACGGGTTACCTAGATTCCCAAAATGGGGACATCTTAAGGAGCTTCACAGAGCTATCAAGTTATGTGAGCGTGTATTGCTTAATGGCAAATCAGTTAATATCACCCTTGGTCCTTCTGTGGAGGCCGATGTCTATACCGATGAATCAGGAGCATGTGCTGCCTTTATTGCAAACATTGACGATAAAAATGATAGGACGGTGGAGTTTCGCAATATGTCATATCACCTGCCGGCGTGGTCGGTTAGCATCCTTCCTGATTGCAAGAATGTAGTCTTTAACACGGCAAAGGTTTCTACTCAGACACATGTAGTTTCGATGATTGATGAGAATTTGCAGCAATCAGATAAAGGTGCAGTGGCTTTCAAATGGGATGTATTGAAGGAGAATGCAGGGATCTGGGGGGAGGCAGACTTTGTTAAAACCGGTTTTGTCGACCTTATAAATACCACCAAAGATACCACTGATTATCTGTGGCACACAACAAGTATATATGTTGGTGAACATGAAGGGTTCCTAAAGAATGGAAGCAAACCAGTTCTTCTAATAAATTCCACTGGTCATGCTCTCCATGCATTCGTGAATCAGGAGTACCAAGGTACCGGAACTGGAAATGGTACACATTCGCCATTCTTTTTCAAGAATCCTATTCCTCTGAGGGCAGGGAAGAATGAGATTGCTTTATTATGCTTGACCGTTGGCTTACCGACTGCTGGACCATTTTACGACTTCGTCGGAGCAGGACTAATAAGTGTAAAGATTAAGGGATTCAACAATGGGACAGTAGACTTGTCTTCTAGTGCCTGGAGTTACAAGATCGGAGTACAAGGAGAACAACTGAAGTTATACCAGGGAGACGGGTCGAGTAGTGTGAAATGGACAACCACATCCAAACCACCTAAAGGGCAGGCATTAACATGGTACAAGGCCGTCGTGGATGCTCCGTCCGGGGATGAACCAATTGGATTGGATATGTTGCATATGGGAAAGGGTCTAGCTTGGTTAAATGGAGAAGAAATTGGAAGATATTGGTCTCGGAATAGCGAGTTCGAGGAAAAAGACTGCGTACAAGAATGTGATTACAGAGGCAAATTCCTCCCTGACAAATGTGACACTGATTGTGGAAAGCCTACACAGAAATGGTATCATGTTCCAAGGTCTTGGTTCAAGCCATCCGGGAACATTCTTGTTATTTTCGAGGAGAAAGGCGGAGATCCAACAAAGATTAAGTTCCTTAGGCGTAAAGTAACCGGCGCATGTGCCAATGTTGCCGAGGATTACCCTTCTATTGGACTTGATTCTCAGGGTGAAGATAAAATCAACAAGAACACTCCTTTTGCCCGTTTAACATGCCCCGGAAACACAATTATATCCTCAGTGAAATTTGCTAGCTTTGGAACCCCTACTGGAAAATGTGGATCTTACCTTTTGGGAAGTTGCCATGATCCTAATAGTAGCACAGTTGTTGAAAAGGCATGCCTAAACAAAAACAATTGCGTCGTAAAACTAACCAAAGAGAATTTCAAGAACAATCTGTGTCCTGGTTCATCAAGGAAACTTGCAGTGGAAGCTATTTGCAGCTGA 2526 0.4359 MKLCFFLCLLCSFTFLALGSNVSYDGRSLIIDGQRKLLLSASIHYPRSVPAMWPSLVQTAKEGGIDVIETYVFWNGHELSPGNYYFGGRFDLVKFVKIVQQAGMYLILRIGPFVAAEWNYGGVPVWLHYIPGTVFRTYNQPFMSHMQNFTTYIVNLMKQEKLFASQGGPIILSQIENEYGYYENFYKEDGKKYAMWAAKMAVAQNTGVPWIMCQQWDAPDPVIDTCNSFYCDQFKPTSPNRPKIWTENWPGWFKTFGGRNPHRPAEDVAYAVARFFQKGGSVQNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPRFPKWGHLKELHRAIKLCERVLLNGKSVNITLGPSVEADVYTDESGACAAFIANIDDKNDRTVEFRNMSYHLPAWSVSILPDCKNVVFNTAKVSTQTHVVSMIDENLQQSDKGAVAFKWDVLKENAGIWGEADFVKTGFVDLINTTKDTTDYLWHTTSIYVGEHEGFLKNGSKPVLLINSTGHALHAFVNQEYQGTGTGNGTHSPFFFKNPIPLRAGKNEIALLCLTVGLPTAGPFYDFVGAGLISVKIKGFNNGTVDLSSSAWSYKIGVQGEQLKLYQGDGSSSVKWTTTSKPPKGQALTWYKAVVDAPSGDEPIGLDMLHMGKGLAWLNGEEIGRYWSRNSEFEEKDCVQECDYRGKFLPDKCDTDCGKPTQKWYHVPRSWFKPSGNILVIFEEKGGDPTKIKFLRRKVTGACANVAEDYPSIGLDSQGEDKINKNTPFARLTCPGNTIISSVKFASFGTPTGKCGSYLLGSCHDPNSSTVVEKACLNKNNCVVKLTKENFKNNLCPGSSRKLAVEAICS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03601 841 FunFam Beta-galactosidase 286 414 - -
Arst8g03601 841 Gene3D - 748 841 IPR043159 -
Arst8g03601 841 ProSiteProfiles SUEL-type lectin domain profile. 755 841 IPR000922 GO:0030246
Arst8g03601 841 FunFam Beta-galactosidase 18 337 - -
Arst8g03601 841 FunFam Beta-galactosidase 578 669 - -
Arst8g03601 841 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 167 179 IPR019801 GO:0004553|GO:0005975
Arst8g03601 841 Pfam Galactose binding lectin domain 763 840 IPR000922 GO:0030246
Arst8g03601 841 Pfam Beta-sandwich domain in beta galactosidase 341 412 IPR041392 -
Arst8g03601 841 Gene3D - 587 734 - -
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 281 296 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 32 49 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 53 71 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 244 259 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 108 127 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 301 317 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 PRINTS Glycosyl hydrolase family 35 signature 165 180 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 Pfam Glycosyl hydrolases family 35 28 333 IPR031330 -
Arst8g03601 841 SUPERFAMILY Galactose-binding domain-like 582 749 IPR008979 -
Arst8g03601 841 CDD Gal_Rha_Lectin_BGal 759 840 - -
Arst8g03601 841 FunFam Beta-galactosidase 752 841 - -
Arst8g03601 841 PANTHER BETA-GALACTOSIDASE RELATED 14 744 IPR001944 GO:0004553|GO:0005975
Arst8g03601 841 SUPERFAMILY Galactose-binding domain-like 396 557 IPR008979 -
Arst8g03601 841 Gene3D Glycosidases 18 337 - -
Arst8g03601 841 SUPERFAMILY (Trans)glycosidases 19 338 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03601 Arst-Chr8 46529931 46536797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03601 4 731 Glycoside Hydrolase AT5G63810 69.714 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03601 - - gmx:100815037 1548.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03601 8 46529931 46536797 Arst8g03601 8 46529931 46536797 ECH