Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03559 ATGGGAAACACTGAGTCATATGAATCTGAAGAAAATCTTTACCAACAATCGTCATCTTATGATCAGAGTTCGGTAAATTCTGTCTATCATCAACCTTCTTCTTATGATAGGAGTTCAATCAATACTACCTATGATCAACCCTCTTCTTATGCTGGGAGTTCGTGGAATACTAGCCACCATCAAACCTCTTCGAATGCTAGGAGTTCAAGCAATACTAGGCCTCAACATAAGCAGCAACCAACATTTATAGCTGACAATTTCAGCTCTTTGGATGAGGTTATTTCTGCTCTAAGAGATGCTGGTCTTGAATCTTCAAATTTAATTCTTGGTATTGATTTCACAAAAAGCAATGAGTGGACAGGCAAGCACTCATTCCATCGAAAAAGTCTTCATCATATTGGAAACAATCCTAATCCATATGAGCAAGCCATATCTATAATTGGTCGTACTCTTTCTTCTTTTGACGAAGATAACCTGATACCATGTTTTGGTTTTGGTGATGCTTCTACACATGATCAGAATGTGTTCAATTTTTATGCTGATGGTAGATATTGTAACGGTTTTGAAGAAGCACTTGAACGTTATAGACAGATTGTTCCACACTTAAAACTTTCAGGTCCAACATCATTTGCGCCGGTAATCGATGCAGCAATTGATATTGTGGAGAAAAGCAATGGTCAATATCATGTTCTTGTTATTATTGCTGATGGACAGGTTTCCAGAAATCCAGATCCAGGAGGACGCAAAAGGCTTAGTCCACAAGAACAAGCAACTATTAATTCTATAGTTGCTGCAAGTCACTATCCTCTCTCAATAATTTTGGTTGGTGTTGGAGATGGACCGTGGGATGAGATGCAGCAGTTTGACGATAACATCACGGAGCGCTTATTTGACAACTTTCAGTTTGTGAACTTCACAAAGATCATGTCTGAGAACACAGAAGCATCAAAGAAAGAAACAGCATTTGCACTTGCTGCTCTTATGGAAATTCCATTTCAATACCGAGTTGCCCAAAATATGCAACTTAACAACGACTCACCAGTTTATCATCATAAACGGCCTCTCCCTCCACCAAAGGAAGTAATAGATCATGATAATGCAGTCCCCGTGATTCCCCCTGTGACAGAAATGCTGGAATCAGCTGAGGAAAAAGCTCCAGCTGCTTCAGAGCCGGTGTGTCCTGTTTGCCTGACCAACCCGAAGGACATGGCTTTTGGATGCGGTCATACAACTTGCAAAGAGTGTGGCATGACATTATCTGCATGCCCGTTGTGCCGGCAGCAAATTACAACTCGTCTGAGATTGTACACTTGA 1314 0.4072 MGNTESYESEENLYQQSSSYDQSSVNSVYHQPSSYDRSSINTTYDQPSSYAGSSWNTSHHQTSSNARSSSNTRPQHKQQPTFIADNFSSLDEVISALRDAGLESSNLILGIDFTKSNEWTGKHSFHRKSLHHIGNNPNPYEQAISIIGRTLSSFDEDNLIPCFGFGDASTHDQNVFNFYADGRYCNGFEEALERYRQIVPHLKLSGPTSFAPVIDAAIDIVEKSNGQYHVLVIIADGQVSRNPDPGGRKRLSPQEQATINSIVAASHYPLSIILVGVGDGPWDEMQQFDDNITERLFDNFQFVNFTKIMSENTEASKKETAFALAALMEIPFQYRVAQNMQLNNDSPVYHHKRPLPPPKEVIDHDNAVPVIPPVTEMLESAEEKAPAASEPVCPVCLTNPKDMAFGCGHTTCKECGMTLSACPLCRQQITTRLRLYT 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03559 437 CDD vWA_copine_like 83 334 IPR010734 -
Arst8g03559 437 SMART VWA_4 104 308 IPR002035 -
Arst8g03559 437 SUPERFAMILY RING/U-box 381 432 - -
Arst8g03559 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 376 437 IPR013083 -
Arst8g03559 437 Pfam Copine 129 341 IPR010734 -
Arst8g03559 437 PANTHER COPINE FAMILY PROTEIN 1 41 413 - -
Arst8g03559 437 ProSiteProfiles Zinc finger RING-type profile. 393 426 IPR001841 -
Arst8g03559 437 Pfam Zinc finger, C3HC4 type (RING finger) 392 431 - -
Arst8g03559 437 SMART ring_2 393 425 IPR001841 -
Arst8g03559 437 SUPERFAMILY vWA-like 105 289 IPR036465 -
Arst8g03559 437 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03559 Arst-Chr8 46215792 46221466 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03559 K16280 - gmx:100776002 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03559 8 46215792 46221466 Arst8g03559 8 46215792 46221466 ECH