Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03541 ATGATCTCAGCCATATTGGCCATGCTCGCGTCTACGTCAACTTCGACCTTCTTTTCAGGCAGGTACCTTAAGCATTTGGGATACGAAGTGTCTTATGTTCGCAATTTCACTGACGTAGATGACAAGATCATTGCTAGAGCAAATGAATTAGGCGAAGATCCAATCAGTTTAAGTCAACGCTACTGTGAAGAGTTCTGCCAAGACATGATAACGCTTAATTGTCTGACTCCTTCTGTGGAACCAAAAGTCTCAGAGCACATGCCCCAAATCATTGATATGATTGAGAAGATACTTAATAATGGTTATGCCTACATTGTTGATGGGGATGTATACTATACTGTAGAAAAGTTTCCTGAATATGGAAAATTATCTGGTCGAGATCTAGAAGACAATCGAGCTGGTGAGAGGGTAGCCGTTGATTCAAGGAAGAAACATCCTGCTGATTTTGCTCTCTGGAAGTCTGCAAAGTCAGGAGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGTTGGCACATTGAATGCAGTGCTATGAGTGCAACTTATCTTGGTTACTCTTTTGACATCCATGGTGGAGGGGTTGACCTTGTGTTTCCCCACCATGAAAATGAAATAGCTCAGAGTTGTGCTGCATGTAATAAAAGCGATATAAGCCTATGGGTACACAATGGATTTGTCACTGTTGACTCCGAGAAGATGTCTAAATCTCTGGGAAACTTTTTCACAATACGGCAGGTTGTAGACATTTATCATCCTCTGGCTTTGAGATATTTTTTGATGGGTGCGCATTATCGATCTCCAATTAACTACTCTATCATACAGCTTGAAAGTGCTTCAGACCGTATTTTTTATATATACGAGACATTGCATGAATGTGAAAGCTTTCTGAATCAACATGATCAGACAGTTAGGAAGGATTCCATCCCACCAGATACTGCAAACATTATTGATAACTTCCATAATGTTTTTGTAACCTCAATGTCTGATGATTTACACACCCCGGTTGTATTGTCTGGACTGGCTGATCCATTAAAATCAATCAATGATTTGCTGCATACTCGTCAGGGTAAAAAACGACAGTTCCGAATAGAATCACTTGCAGCTTTGGAGAAGAGCATCAGGAATGTCCTGACTATTTTAGGACTTTTGCCTACAAGTTATTCTAAGGTTCTGCAGCAGCTTAGAGAAAAAGCTTTGAAACGTGCGAACTTGACAGAAGATGAAATCTTGCAGAAAATCGAAGAACGGGCCGCTGCCAGAATACAAAAGGAGTACGCCAAATCGGACGCAATAAGAAAGGATTTGGCTGTTGTTGGGATTACTCTCATGGACAGTCCTAATGGCACAACTTGGAGGCCTACCATTCCCCTTCATCTACAAGAGCAACAAAACAATGCACCATAA 1410 0.4156 MISAILAMLASTSTSTFFSGRYLKHLGYEVSYVRNFTDVDDKIIARANELGEDPISLSQRYCEEFCQDMITLNCLTPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYYTVEKFPEYGKLSGRDLEDNRAGERVAVDSRKKHPADFALWKSAKSGEPFWESPWGPGRPGWHIECSAMSATYLGYSFDIHGGGVDLVFPHHENEIAQSCAACNKSDISLWVHNGFVTVDSEKMSKSLGNFFTIRQVVDIYHPLALRYFLMGAHYRSPINYSIIQLESASDRIFYIYETLHECESFLNQHDQTVRKDSIPPDTANIIDNFHNVFVTSMSDDLHTPVVLSGLADPLKSINDLLHTRQGKKRQFRIESLAALEKSIRNVLTILGLLPTSYSKVLQQLREKALKRANLTEDEILQKIEERAAARIQKEYAKSDAIRKDLAVVGITLMDSPNGTTWRPTIPLHLQEQQNNAP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03541 469 PANTHER CYSTEINYL-TRNA SYNTHETASE 21 465 IPR024909 -
Arst8g03541 469 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 311 455 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Arst8g03541 469 Hamap Cysteine--tRNA ligase [cysS]. 3 456 IPR015803 GO:0004817|GO:0005524|GO:0006423
Arst8g03541 469 Gene3D HUPs 10 273 IPR014729 -
Arst8g03541 469 PRINTS Cysteinyl-tRNA synthetase signature 159 177 IPR024909 -
Arst8g03541 469 PRINTS Cysteinyl-tRNA synthetase signature 190 211 IPR024909 -
Arst8g03541 469 PRINTS Cysteinyl-tRNA synthetase signature 30 39 IPR024909 -
Arst8g03541 469 FunFam Cysteine-tRNA ligase-like protein 122 272 - -
Arst8g03541 469 SUPERFAMILY Nucleotidylyl transferase 20 279 - -
Arst8g03541 469 Gene3D - 275 455 - -
Arst8g03541 469 Pfam tRNA synthetases class I (C) catalytic domain 20 280 IPR032678 -
Arst8g03541 469 FunFam Cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 273 455 - -
Arst8g03541 469 CDD CysRS_core 21 273 IPR032678 -
Arst8g03541 469 NCBIfam cysteine--tRNA ligase 21 454 IPR015803 GO:0004817|GO:0005524|GO:0006423
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03541 Arst-Chr8 46065842 46069918 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03541 K01883 - gmx:100786700 826.624