Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03536 ATGTTCGCGAGGATGACGGTGGAAGATTCTAGAGTACTTCTGCCTGGAAAGTTCTACCCTTCATGGGTTGTATTCACTAAGAGACAGAAGTTAAAATGGCTCAACACGCAACTCGACAAGATGTGGCCATTCATCAATGATGCAGCTTCGGAGTTGATAAAGAGTAGTGTGGAGCCAATTCTAGAGCAATATAAGCCAGTTATTTTGGCTTCTCTTACCTTCTCCAAGTTGACCCTTGGCACAGTGGCTCCACAATTTACCGGAATTGCCATACTTGAAGAGGAAAGTGGGCCTAATGAATTTACCATAGAGTTAGAGATGCAGTGGGATGGTGACCCCAACATTGTTCTTGATATCAAAACCAAAGTTGGCGTCGTACTTCCCATCCAGGTAAAAAATATTGGATTCACTGGGGTTTTTTGGTTGATATTCAAACCACTAGTGGATGAGTTCCCTACTTTTTCAGCTGTTTCTGTTTCATTGAGAGAAAAGAAAGATCTGGATTTTACTCTAAAAGTAGTCGGCGGTGATATATCAGCTTTACCGGGGGTATCTGATGCTATAGAGGAAACAATTCGTGATGCTATTGAAGACTCTATAACTTGGCCAATGCGCAAAGTCATACCAATTTTACCTGGGGATTACAGTAATCTGGAGTTGAAACCGGTTGGAATATTAGATGTGAAACTGGTGCAAGCAAAGGACTTAACAAATAAGGATATCATTGGTAAATCCGACCCTTTTGCTGTCCTGTTTGTAAGGCCACTTCGTGATAGAACCAAAACAAGCAAAGTAATCAACAATGACTTGAATCCAATATGGAATGAGCACTTTGAGTTCATTGTTGAAGATGCGGATACACAGCACTTGACTGTAAGAGTTTTCGATGATGAAGGCATTTCTGCTGCCGAGCTTATTGGTTGTGCCCAAATGCCTCTAAAGGAACTAGAACCTGGTAAAGTCAAGATTGTGTGGTTGAAACTGGTCAAGGATTTGGAGGTCCATAGGGATAACAAATACAGGGGTGAGGTGCACTTGGAGCTGTTGTACATTCCACATGGAACAGATGACAGCTTTAGGAACCCCTTCGACCCTGATTTCGCATTGACCATATTCGAGAAGACCCTCAAGAGTGGAACTGAACCAGAGGCTGAGGATATTACAGCACGAAAGAAGAACGTCATTGTAAGAGGTGTTCTCTCTGTGACGGTTATTTCAGCTGAAGACTTGCCAGTTGTGGACTTAATGGGCAAGGCTGATCCATTTGTTGTCCTGACGTTGAAGAAATCAGAGAAAAAACTCAAGACTAGGGTCGTAAACGAATCCTTAAATCCAGTCTGGAATCAAACATTTGACTTTGTTGTAGAGGACGGCTTACATGAAATGTTAATTGTTGAAGTCTGGGATCACGATACTTTTGGGAAGGACAAAATGGGAAAAGTGATAATGACTCTAACAAAGGTGATCTTAGAAGGGGAATATCAGGAAACGTATACACTAGAGGGAGCTAAATCTGGAAGGCTTACTTTGCATCTGAGATGGACTCCACAGCACAAGTACCGGGATCCTTAG 1572 0.4224 MFARMTVEDSRVLLPGKFYPSWVVFTKRQKLKWLNTQLDKMWPFINDAASELIKSSVEPILEQYKPVILASLTFSKLTLGTVAPQFTGIAILEEESGPNEFTIELEMQWDGDPNIVLDIKTKVGVVLPIQVKNIGFTGVFWLIFKPLVDEFPTFSAVSVSLREKKDLDFTLKVVGGDISALPGVSDAIEETIRDAIEDSITWPMRKVIPILPGDYSNLELKPVGILDVKLVQAKDLTNKDIIGKSDPFAVLFVRPLRDRTKTSKVINNDLNPIWNEHFEFIVEDADTQHLTVRVFDDEGISAAELIGCAQMPLKELEPGKVKIVWLKLVKDLEVHRDNKYRGEVHLELLYIPHGTDDSFRNPFDPDFALTIFEKTLKSGTEPEAEDITARKKNVIVRGVLSVTVISAEDLPVVDLMGKADPFVVLTLKKSEKKLKTRVVNESLNPVWNQTFDFVVEDGLHEMLIVEVWDHDTFGKDKMGKVIMTLTKVILEGEYQETYTLEGAKSGRLTLHLRWTPQHKYRDP 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03536 523 CDD SMP_SYT 20 210 - -
Arst8g03536 523 CDD C2 226 328 - -
Arst8g03536 523 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 2 514 IPR045050 GO:0008289
Arst8g03536 523 FunFam Plant synaptotagmin 219 361 - -
Arst8g03536 523 ProSiteProfiles C2 domain profile. 381 498 IPR000008 -
Arst8g03536 523 Pfam C2 domain 398 499 IPR000008 -
Arst8g03536 523 Pfam C2 domain 224 328 IPR000008 -
Arst8g03536 523 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 30 210 IPR039010 -
Arst8g03536 523 ProSiteProfiles C2 domain profile. 203 326 IPR000008 -
Arst8g03536 523 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 394 517 IPR035892 -
Arst8g03536 523 CDD C2 400 496 - -
Arst8g03536 523 SMART C2_3c 399 497 IPR000008 -
Arst8g03536 523 SMART C2_3c 225 325 IPR000008 -
Arst8g03536 523 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 222 353 IPR035892 -
Arst8g03536 523 Gene3D C2 domain 220 358 IPR035892 -
Arst8g03536 523 Gene3D C2 domain 395 521 IPR035892 -
Arst8g03536 523 PRINTS C2 domain signature 441 454 IPR000008 -
Arst8g03536 523 PRINTS C2 domain signature 463 471 IPR000008 -
Arst8g03536 523 PRINTS C2 domain signature 415 427 IPR000008 -
Arst8g03536 523 FunFam Extended synaptotagmin-2 380 518 - -
Arst8g03536 523 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 27 211 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03536 Arst-Chr8 46028642 46035830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03536 216 515 Lipid Metabolism Gene Families AT1G51570 22.492 3.84e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03536 - - gmx:100787972 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03536 8 46028642 46035830 Arst8g03536 8 46028642 46035830 ECH