Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03512 ATGGCTCCCAGCACGATTCGGAAGGCAATTGGTGCGGTGAAGGACCAAACGAGCATAGGGATTGCGAAGGTTGCGAGCAACATGGCGCCGGACTTGGAGGTTGCGATCGTGAAAGCGACGAGCCACGACGACGATCCCGCCGGCGAGAAGTACATACGCGAGATCTTGAACCTCATGTCTTACTCCCGTGGATACGTCCACGCGTGTGTCACCGCCGTGTCGAAGCGATTGGGGAAGACGCGCGACTGGATCGTTGCTCTGAAAGCTCTCATGCTGGTTCACCGACTCATGAACGAGGGTCCACCGATGTTCCAAGAAGAGATACTCTACGCGACTAGGAGAGGAACCAGGCTCCTCAACATGTCTGATTTCAGGGACGAGGCTCACTCTAGCTCATGGGATCACTCTGCTTTTGTAAGAACTTATGCTATGTATCTTGATCAACGTCTTGAGTTGATGCTTTTTGATAGGAAGAGCAGTGGCGCTGCTGGTGGAGCTGGAAGCGCTGGCGCTGGCGGAAGCGGCAGTGGTGGCGGTTTTGATGATAGGTTTGGGGGTAGGGACAATTTCCGGTCCCCTCCGCCGCGGCCTTACGAGTATGAGTACGGCGGAGGTGAATTCAGGGGAGAAGGGTATGGTTATGGGAACGGAGGGATGAGGAGGACGAGGTCGTTTGGTGATGTGACTGAGAGGGAAAATGTTGGAAGGGTTGATAAGAGTATTGTTGCTGTGACTCCGTTGAGGGACATGAAGCCGGAGAGGATTTTCGGTAAGATGGGACATTTGCAGAGGTTGCTGGATCGGTTCTTGGCTTGTAGGCCTACCGGTTTGGCCAAGAACAGCAGGATGATCTTGATTGCGTTGTACCCTGTTGTGAAGGAGAGTTTTCAGCTCTATGCTGATATCTGTGAGGTTCTTGCTGTGCTTCTTGATAAGTTCTTTGATATGGAATACCCTGATTGTGTTAAGGCCTTTGATGCTTATGCCAGCGCGGCGAAGCAGATCGACGAGCTTATTGCGTTCTTCAACTGGTGCAAGGATACAGGTGTGGCGAGATCTTCTGAGTACCCAGAGGTTCAGAGGATTACTAGCAAGCTGTTGGAGACCCTGGAGGAGTTTGTTAGGGATAGGGCCAAGAGGCCTAAGAGTCCTGAGAGGAAAGAGGAATTGCCCCCACCACCTGCAAAAGAGGAGGAACCGGAGCCGGATATGAATGAGATCAAGGCACTGCCTCCACCGGAGAATTACACCCCGCCTCCGCAGCCTGAGCCAGAGCCTAAGCCACAGCCACCACGGGTTACAGAGGACTTGGTGAATCTGAGAGATGATGCAGTCAGTGCTGATGATCAAGGTAACAGATTGGCTTTGGCACTCTTTGCCGGTGCTCCTGGTAGCAATGCTAATGGTTCTTGGCAAGCCTTCCCATCAAATGGACAGCCCGAAGTTACTTCGGCTTGGCAGACTCCAGCAGCTGAGGCCGGGAAGGCCGATTGGGAATTGGCGCTGGTAGAAACTGCTAGTAATTTATCAAGGCAGAAGCAGAATTTGGGTGGTGGTCTTGATCCCTTATTGTTGAATGGTATGTATGATCAAGGAATGGTGAGGCAGCATGTGAGCACATCACAATTGAGTGGAGGAAGTGCAAGCAGTGTGGCATTGCCCGGACCCGGGAAAACCACCACACCTGTTTTGGCTCTCCCTGCCCCAGATGGGTCAGTGCAGCCGGTGAATCAGGATCCCTTCGCGGCATCATTGACTATTCCACCACCTTCTTATGTGCAAATGGCGGATATGGAGAAGAAGCAGCATTTGCTTGTGCAGGAACAGGTTGTGTGGCAGCAGTATGCAAGGGATGGAATGCAAGGCCAATCTAGCTTGGCCAGACTAAACGGCAATGGTTACTATCCCGGAACTCCAATGCCTGCAGCAATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCTCCCGCTGGGTATTATCACACTCCTTACTGA 1998 0.525 MAPSTIRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPAGEKYIREILNLMSYSRGYVHACVTAVSKRLGKTRDWIVALKALMLVHRLMNEGPPMFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKSSGAAGGAGSAGAGGSGSGGGFDDRFGGRDNFRSPPPRPYEYEYGGGEFRGEGYGYGNGGMRRTRSFGDVTERENVGRVDKSIVAVTPLRDMKPERIFGKMGHLQRLLDRFLACRPTGLAKNSRMILIALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELIAFFNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEELPPPPAKEEEPEPDMNEIKALPPPENYTPPPQPEPEPKPQPPRVTEDLVNLRDDAVSADDQGNRLALALFAGAPGSNANGSWQAFPSNGQPEVTSAWQTPAAEAGKADWELALVETASNLSRQKQNLGGGLDPLLLNGMYDQGMVRQHVSTSQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLTIPPPSYVQMADMEKKQHLLVQEQVVWQQYARDGMQGQSSLARLNGNGYYPGTPMPAAMPYGMPPVNGMGPPAGYYHTPY 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03512 665 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Arst8g03512 665 Gene3D - 2 156 IPR008942 -
Arst8g03512 665 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Arst8g03512 665 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 607 IPR045192 GO:0048268|GO:0072583
Arst8g03512 665 MobiDBLite consensus disorder prediction 412 428 - -
Arst8g03512 665 MobiDBLite consensus disorder prediction 375 405 - -
Arst8g03512 665 SMART enth_2 30 160 IPR013809 -
Arst8g03512 665 FunFam Clathrin coat assembly protein 3 156 - -
Arst8g03512 665 FunFam putative clathrin assembly protein At2g25430 242 386 - -
Arst8g03512 665 Pfam ANTH domain 31 153 IPR011417 GO:0005543
Arst8g03512 665 Pfam ANTH domain 232 376 IPR011417 GO:0005543
Arst8g03512 665 SUPERFAMILY GAT-like domain 246 376 - -
Arst8g03512 665 CDD ANTH_N_AP180_plant 32 152 - -
Arst8g03512 665 MobiDBLite consensus disorder prediction 375 434 - -
Arst8g03512 665 Gene3D ANTH domain 239 389 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Arst8g03512 665 MobiDBLite consensus disorder prediction 165 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03512 Arst-Chr8 45791020 45793789 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03512 - - adu:107463239 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03512 8 45791020 45793789 Arst8g03512 8 45791020 45793789 ECH