Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03457 ATGAGTAGGCCAGGAGATTGGAACTGCAGGACATGCAACCACCTCAACTTCCAAAGAAGGGAATCATGCCAACGGTGCGGCGAGCCCAGGGGTGTCGGTGCCGGTGGAGACTATGGCGGAGCCTTTGGGGGTAGAGGCTCCTCCTCTTTTGGCTTCACCACCGGCCCCGACGTTCGCCCTGGAGACTGGTACTGCACCGTTGGCAATTGTGGAGCCCACAACTTCGCAAGCAGGTCTAGCTGCTTCAAGTGTGGTGCTCCCAAGGAGGACTCCTCCGCCGCCGGATTTGACGCCGACATTCCTCGAACTAGAGGCTATAGCTTTGCCGGCACCACTGCTGCTCGCCCTGCTTGGAAATCCGGCGACTGGATATGTACTAGGTCTGGATGCAATGAGCATAACTTTGCAAATAGAATGGAATGCTATCGATGCAATGCACCAAGGGACTCTTCTAGTTCTAGACCTCCCTATTCATCCTAG 480 0.5563 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRGVGAGGDYGGAFGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAAGFDADIPRTRGYSFAGTTAARPAWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSSRPPYSS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03457 159 ProSitePatterns Zinc finger RanBP2-type signature. 63 84 IPR001876 -
Arst8g03457 159 SUPERFAMILY Ran binding protein zinc finger-like 114 151 IPR036443 -
Arst8g03457 159 Pfam Zn-finger in Ran binding protein and others 59 90 IPR001876 -
Arst8g03457 159 Pfam Zn-finger in Ran binding protein and others 119 148 IPR001876 -
Arst8g03457 159 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Arst8g03457 159 SUPERFAMILY Ran binding protein zinc finger-like 2 31 IPR036443 -
Arst8g03457 159 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Arst8g03457 159 FunFam Ran-binding zinc finger protein 112 150 - -
Arst8g03457 159 ProSitePatterns Zinc finger RanBP2-type signature. 123 144 IPR001876 -
Arst8g03457 159 ProSiteProfiles Zinc finger RanBP2 type profile. 119 150 IPR001876 -
Arst8g03457 159 SUPERFAMILY Ran binding protein zinc finger-like 55 91 IPR036443 -
Arst8g03457 159 FunFam Ran-binding zinc finger protein 53 90 - -
Arst8g03457 159 SMART zf_4 121 147 IPR001876 -
Arst8g03457 159 SMART zf_4 61 87 IPR001876 -
Arst8g03457 159 SMART zf_4 5 29 IPR001876 -
Arst8g03457 159 Gene3D - 113 151 - -
Arst8g03457 159 Gene3D - 2 32 - -
Arst8g03457 159 Gene3D - 54 91 - -
Arst8g03457 159 ProSiteProfiles Zinc finger RanBP2 type profile. 59 90 IPR001876 -
Arst8g03457 159 PANTHER ZINC FINGER PROTEIN 56 152 - -
Arst8g03457 159 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03457 Arst-Chr8 45400105 45401774 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03457 - - gmx:100811107 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03457 8 45400105 45401774 Arst8g03457 8 45400105 45401774 ECH