Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03436 ATGCCTATGCACAAGCACAAGGTTTCTGTTCATCTTCTATCCTTCCAGGCCCTCGTTTTTTTCTTATCAATTTTCATTCACTTCTCTCATTGTGATGTTGGCACTGCTTCTCACTACGGTCCTCCCTTTTTACCCACAGCATGTTACGGTAAAGACGCATCGGAGTTTCCATCGAGCAACATGTTTGCATCAGCAGGAGAAGGCATATGGGACAATGGTGCTGCATGTGGTAGGCAGTATCAGGTGAGGTGCATCAGTGCAGCCGCACCTAGAACCTGCATTCCTGGCCAGTTGATCCAGATCAAGATCGTCGATCGCGCGCAATCAACGGTCTCTAGGCCTTCCAGGGATGGAACTTCCATGGTCCTCTCCACCACTGCATTCCAGGCCATTGCAAATGCCTCTGCTTCTTTGATCAACATTGAATTTCAACAGGTTTAA 441 0.4807 MPMHKHKVSVHLLSFQALVFFLSIFIHFSHCDVGTASHYGPPFLPTACYGKDASEFPSSNMFASAGEGIWDNGAACGRQYQVRCISAAAPRTCIPGQLIQIKIVDRAQSTVSRPSRDGTSMVLSTTAFQAIANASASLINIEFQQV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03436 146 CDD DPBB_EG45-like 32 144 - -
Arst8g03436 146 Pfam Lytic transglycolase 69 142 IPR009009 -
Arst8g03436 146 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 34 146 IPR007112 -
Arst8g03436 146 Gene3D - 30 146 IPR036908 -
Arst8g03436 146 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 10 145 - -
Arst8g03436 146 SUPERFAMILY Barwin-like endoglucanases 19 146 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03436 Arst-Chr8 45219160 45226016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03436 - - gmx:100803494 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03436 8 45219160 45226016 Arst8g03436 8 45219160 45226016 ECH