Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03335 ATGGCCGTTCCCTTTTTCAAAACAACATTTGTTCCATCTCTTTCCGCAAAAACCACCACTCGCATCACTCCTTCAAAGTCCACAATACCCTTCATTCGCTTCCTCACATTCTCAACAATGAACTCATCTCCATCACCGTCATCACCATCGATCTACCACGTGCCAGACCTAGGTGCCAACGATATGGACCGCGTGGCAGACCACACTTTCCGAACCTACAATGCAAATGTGGCCAAGAGAAGTGGTAAAGGGACGGCAATTGTGTGGTTCAGAAATGATCTGAGGGTGTTAGACAATGAAGTTCTCTACAAAGCGTGGCTCTCTTCGGAAACTCTCTTACCCGTTTTCTGTGTTGATCCTCGCCTCTTTTCCACCACTTACCATTTTGGTTTTCCCAAAACTGGAGCATTGAGAGCTCAATTTTTCGTCGAATGCTTGGCCGACCTGAGGAAGAACTTGACAAAATTTGGACTTAATTTGCTTATACAACACGGAAAGCCTGAAGATATTCTTCCTTCTCTAGCTAAAGCTTTCAAAGCTCATACAGTGTATGCCCAGAAAGAAACCTGCAGTGAGGAGCTGAATGTTGAAAGATTAGTCAGCAAAGGTCTTCGACAAGTAGCAATGCCATCCGGGGAATCCAGTAGTTCAACGAATTCAAACAACTTCCCCAAGTTACAATTGATTTGGGGTACCACCTTGTACCACATAGACGACCTTCCTTTTGATGCCGGTAGTTTGCCAGACGTGTATACTCAATTTCGTAAGACTGTCGAGGCGAAGTGTTCGATACGTCCGTGCATCAAACTTCCTGTGTTGCTTGGACCTCCTCCACTTGTTGAGGATTGGGGGTGTGTTCCTTCATTAGAGAAGCTGGGACTTAGCTCACAGAATGTTAGCAAGGGGATGAAATTTGTAGGAGGTGAAACTGCGGCGTTGAGCAGAGTATATGAATACTTTTGGAAGAAGGATTTGCTAAAGGTATATAAAGAGACCAGAAATGGAATGTTAGGACCTGATTACTCCACTAAGTTCTCACCATGGCTTGCATTTGGAAGCTTGTCTCCTCGTTTAATACATGAAGAGGTGAAGAGATATGAGAATGAAAGGATAGCAAATGGTTCTACATACTGGGTCTTGTTCGAGTTGATATGGAGGGATTACTTCCGGTTTTTATCGGTGAAATATGGGAATTCAATTTTCTATTTAGGTAATTCTGAAGCATGGAGAGACGGCCGTACCGGATATCCTTTGATTGATGCCAATATGAAAGAACTATCAACAACAGGGTTTATGTCAAACCGAGGACGGCAGATTGTGTGTTCATTTCTTGTTCGTGATATGGGCATAGATTGGCGAATGGGAGCAGAGTGGTTCGAGACGTGTCTTCTAGATTATGATCCATGTTCTAATTATGGAAACTGGACTTATGGTTCAGGAGTTGGGAATGATCCAAGAGAAGATCGATATTTCAGCATTCCGAAACAAGCACAAACATATGATCCGGAAGGAGAATACGTTGCATACTGGTTGCCACGATTACAAACAATTCCGAAAGAGAAAAGGAACTTTCCTGGAAATTTATACATCCGTCAAATTGTGCCTCTCAAGTATGGTAGACTCCAGAATGACGGCGCAAGAAGCAGCAATGATAGAAGGAATGACAGAAGATGGAACAGGAACTAA 1686 0.4336 MAVPFFKTTFVPSLSAKTTTRITPSKSTIPFIRFLTFSTMNSSPSPSSPSIYHVPDLGANDMDRVADHTFRTYNANVAKRSGKGTAIVWFRNDLRVLDNEVLYKAWLSSETLLPVFCVDPRLFSTTYHFGFPKTGALRAQFFVECLADLRKNLTKFGLNLLIQHGKPEDILPSLAKAFKAHTVYAQKETCSEELNVERLVSKGLRQVAMPSGESSSSTNSNNFPKLQLIWGTTLYHIDDLPFDAGSLPDVYTQFRKTVEAKCSIRPCIKLPVLLGPPPLVEDWGCVPSLEKLGLSSQNVSKGMKFVGGETAALSRVYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLAFGSLSPRLIHEEVKRYENERIANGSTYWVLFELIWRDYFRFLSVKYGNSIFYLGNLXEAWRDGRTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPRLQTIPKEKRNFPGNLYIRQIVPLKYGRLQNDGARSSNDRRNDRRWNRN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03335 562 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 83 283 IPR036155 -
Arst8g03335 562 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 84 217 IPR006050 -
Arst8g03335 562 MobiDBLite consensus disorder prediction 543 562 - -
Arst8g03335 562 Gene3D HUPs 49 231 IPR014729 -
Arst8g03335 562 Pfam FAD binding domain of DNA photolyase 407 523 IPR005101 -
Arst8g03335 562 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 404 543 - -
Arst8g03335 562 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 303 528 IPR036134 -
Arst8g03335 562 PRINTS DNA photolyase signature 435 453 IPR002081 -
Arst8g03335 562 PRINTS DNA photolyase signature 415 431 IPR002081 -
Arst8g03335 562 PRINTS DNA photolyase signature 474 488 IPR002081 -
Arst8g03335 562 Pfam DNA photolyase 86 265 IPR006050 -
Arst8g03335 562 Gene3D - 232 401 - -
Arst8g03335 562 PANTHER CRYPTOCHROME 84 543 IPR002081 -
Arst8g03335 562 MobiDBLite consensus disorder prediction 547 562 - -
Arst8g03335 562 NCBIfam DASH family cryptochrome 85 514 IPR014133 GO:0003913|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03335 Arst-Chr8 44325380 44331531 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03335 K25656 - gmx:100783312 872.848