Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03325 ATGGAAGGTTCTGGAAGCAGCGTTTCGGCGTCATCATCGGCAGCGATGGCGCAACAAACATGGGAGCTGGAAAACAACATAATACCCATGGACACACCACCTTCCGGCGCCGACGACTCCATCTTCTACTATGACGAGTCACTCCAAGGAGAGTACCAGCGCGAAAAGCCATGGTCCAACGACCCTCACTACTTCAAGCGCGTCAAGGTTTCCGCTCTCGCGTTACTCAAGATGGTTGTTCACGCGCGTTCTGGCGGCACCATCGAGGTCATGGGTCTCATGCAAGGCAAGATCGACGGTGACTCTATCATCGTCATGGATGCTTTTGCTTTGCCCGTTGAGGGAACCGAAACGCGTGTCAATGCCCAAGCTGATGCGTATGAGTACAGTGTTGAGTATGATCAGACCAACAAGCGTGCTGGGCGACTGGAAAATGTTGTTGGGTGGTATCACTCTCACCCTGGTTATGGGTGCTGGCTTTCTGGTATAGATGTGTCGACACAGATGCTCAATCAGCAGTTTCAGGAGCCCTTTCTGGCTGTTGTTATTGACCCCACTAGGACTGTTTCTGCTGGGAAAGTTGAGATTGGGGCCTTCAGGACATACCCTGAAGGGTATAAGCCTCCTGATGATCCTATTTCCGAGTACCAAACCATACCCCTCAATAAGATTGAAGACTTTGGTGTCCATTGTAAACAGTATTATTCATTGGATATCACTTACTTTAAGTCTTCTCTTGATTCACACCTCTTGGATCTGCTATGGAACAAATATTGGGTGAATACGCTTTCTTCTTCTCCTCTATTGGGTAATGGGGACTATGTTGCTGGACAAATCTCAGATTTAGCTGAAAAATTAGAACAAGCAGAGACTCAATTGGCGCATGCACGCTTTGGACCATTATTAGCACCTGCTCCGAGAAAGAAAGAAGAAGAGTCTCCACTCGCTAAGATTACTCGTGATGGTGCAAAAATTACTGTGGAGCAAGTGCATGGACTAATGTCACAGGTAATCAAGGATATTCTATTCAACTCTGTTCAATCAAGTAGGTCTCGCACAGAAACATCTGGCCCTGAGCCCATGATTGAAAGTTGA 1095 0.474 MEGSGSSVSASSSAAMAQQTWELENNIIPMDTPPSGADDSIFYYDESLQGEYQREKPWSNDPHYFKRVKVSALALLKMVVHARSGGTIEVMGLMQGKIDGDSIIVMDAFALPVEGTETRVNAQADAYEYSVEYDQTNKRAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAETQLAHARFGPLLAPAPRKKEEESPLAKITRDGAKITVEQVHGLMSQVIKDILFNSVQSSRSRTETSGPEPMIES 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03325 364 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 55 352 - -
Arst8g03325 364 Pfam Cop9 signalosome subunit 5 C-terminal domain 264 344 IPR040961 -
Arst8g03325 364 ProSiteProfiles MPN domain profile. 68 205 IPR037518 -
Arst8g03325 364 SMART pad1_6 67 204 IPR000555 GO:0005515|GO:0008233|GO:0008237
Arst8g03325 364 CDD MPN_RPN11_CSN5 57 329 - -
Arst8g03325 364 FunFam COP9 signalosome complex subunit 5 11 270 - -
Arst8g03325 364 SUPERFAMILY JAB1/MPN domain 67 204 - -
Arst8g03325 364 Gene3D Cytidine Deaminase, domain 2 9 270 - -
Arst8g03325 364 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 65 176 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03325 Arst-Chr8 44282853 44287263 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03325 K09613 - gmx:100784909 652.514