Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02848 ATGAAGCTGGTTGTGGAGGTCATAGATGCTCATGATCTTATGCCAAAAGACGGCGAAGGATCAGCAAGTCCATTCGTCGAAGTAGACTTCGAAAACCAACTAAGCAGAACAAGAACTGTCCCAAAGAACCTCAACCCAACTTGGAACCACAAGCTGCTGTTCCAGTTTGATTCAACCAAACCTTACCACCACCAATCCATTGAAGTCTCCGTGTACCACGAGAGGCGACCGGTTCCTGGCCGGAGCTTCCTTGGTCGAGTGAGAATTCCTTGCTCCAATCTTGTCAAGGAAGGTGAGGAAGTTTATCAAACTTACCCTCTTGAAAAGAAGTGGTTTTTCTCTCCTGTGAAAGGTGAAATTGGCCTTAAAGTTTATATTGCATCACATTCCAAACCCAAAATCAGTCCTTCCATTTTGATTTCAGAACTTGAAAAACTCTCACCTCACACTCCTCTGCCTCAAGCACCACAATCCAACACTAAAAATCTTTCTCCTACTCATTTTCATAGTAGTCCTCCCTCAATAGCTACAGAAGATACAGTCCTTACTGAAGAAACTTCAGAATCTGAACCCAAAGAAGTTACTACATCATTTGACACTTCAGAACAAGTCACCGAAGAATCAGGGATAGTAAACAAAGAAGGCGAAACAAATCTCGCTGCTCGAATTCAGTGTAGTGGCAGTGATACTGATCAAGCACCAAAGCAAGAGAAGAGAGAACCTGTCCCCGAGAGAGCCCAACAGCTACACAGACACCAAGTTCACCAGCAACCAATGATTTCAATTAAGAGACGGCAGCGAGGCACGCCGGCCGCGGCCGCTATGCAATCTGTTAATTTTCCTCAACAAGTCCACCGCAGTAGCCATGACCATCCTAGTACTCTTGGCAACATTCCTAGTAGTCTTGACGATCACGGCAGCCTGGATGATGAGGACTACAATGTGAAGGACACCAACTTGCAGCTGGGCGAGCGGTGGCCTAATGGTGGAAGAGGGTGGATGAGTGGCGGCGAAAGGTTCTCGAGCACCTATGACCTTGTTGAGCAGATGTTCTATCTTTATGTCCGAGTAGTGAAAGCCAAAGATCTTCCACCAAGCACTCTCACTTCAAGTTGTGATCCTTATGTGGAGGTGAAGCTTGGTAACTACAAAGGGAGAACAAAGCACATTGAGAAGAAATTGAACCCTGAGTGGAACCAAGTCTTCGCTTTCTCAAAAGACCGCATTCAATCTTCGATTCTTGAGGTCTTTGTGAAAGATAAAGACATGCTCGGAAGAGATGACTATCTTGGAAGGGTGATCTTTGACCTCAATGAGGTTCCAACCAGAGTTCCACCAGATAGTCCTTTGGCACCTCAGTGGTACAGACTCGAAGACCGGCGAGGAGATGGGAAGGTAAGGGGTGATATTATGCTTGCAGTGTGGATGGGAACTCAAGCAGATGAAGCTTTCTCAGATGCTTGGCATGCTGATGCTGCCTCAGTGTACGGCGAAGGCGTTTTCAACATTAGATCAAAGGTTTATGTGTCTCCAAAACTGTGGTATCTGAGAGTCAACGCTATTGAAGCTCAAGATGTGATACCTAGTGACCGAAATCGCCTACCGGAGCTTTTTGTCAAAGGACAGGTTGGCAACCAAGTTTTGAGGACAAGGATATGTCCAACTAGAACAACAACGCCGGTTTGGAATGAAGATTTGGTTTTCGTGGCGGCCGAACCATTTGAGGAGCAACTAACAATAACTGTGGAGGATCATTTGCACCCTACAAAAGATGAGGTACTTGGGAAGATAACCTTACCAATGACCCTCTTCGAGAAGCGGCTAGATCACCGGCCGGTTCATTCCCGTTGGTTCAATCTGGAGAAGTATGGTTTCGGAATGCTAGAAGCTGATAGGAGGAAGGAATTGAAATTTTCAAGCAGGATTCACCTCAGAATTTGCCTTGAAGGTGGATACCATGTGATGGATGAATCCACCATGTACATGAGTGATCAAAGACCAACTGCGAGGCAGCTGTGGAAGCAGCCGATTGGGATACTTGAAGTAGGCATCTTAGGAGCACAGGGGCTTCTCCCAATGAAGATGAAGGATAGCCGCGGCAGCACAGATGCCTATTGCGTCGCCAAGTACAGCCAGAAATGGGTCAGAACAAGAACAATTCTTGACACTTTCAGTCCAAAGTGGAACGAGCAATACACATGGGAAGTTTATGATCCTTGTACTGTCATAACTTTGGGGGTTTTCGATAACTGCCATTTAGGCAGCAATGCGGCGGCACGTGATTCCCGAATTGGAAAGGTCAGGATCAGGCTCTCAACATTGGAAGCTAACAGAATCTACACTCATTCTTATCCTCTCCTTGTTCTGCACCCGCATGGTATCAAGAAGATGGGTGAGCTTCAGCTAGCAGTGAGGTTCACCACACTCTCACTAGCTAACATTTTTCACATTTATGGCCAACCGTTGCTTCCAAAGATGCATTACTTGCATCCTTTCACTGTCAACCAAGTAGACAATTTACGCTACCAAGCTATGAACATTGTGGCCACGAGACTAGGAAGAGCTGAACCTCCTCTCAGGAAGGAGGTAGTTGAGTACATGTTGGATGTTGATTCTCATATGTGGAGCATGAGGAGAAGCAAGGCGAATTTCTTCCGAATCATGTCGCTTTTTTCCGGAATGATCACAATGGGTCAATGGTTCAATCAAGTTTGTCACTGGAAGAATCCCATCTCATCAGTCCTTGTTCACATCCTTTTCCTGATACTAATTTGGTATCCCGAATTGATGCTCCCAACCTTATTCCTATACATGTTCTTCATAGGCCTATGGAACTATAGGTTCCGGCCTAGGAACCCGCCTCACATGGACACTAAACTTTCCTGGGCGGAGGCCGTTCACCCGGACGAACTCGACGAGGAGTTCGATACATTCCCAACTTCAAGATCTCATGATGTTGTGAGGATGAGGTATGACAGGCTAAGAAGTGTTGCAGGTAGGATTCAAACAGTTGTTGGAGACATTGCTACACAAGGTGAGAGATTCCAGTCTCTGCTGAGTTGGAGGGACACAAGAGCAACTAGCCTCTTTATAGTGTTCAGCTTCTGTTCGGCGGTGGTTCTCTATGCAACGCCACCGAGAGTGGTGGCTCTGGTCACCGGCTTGTATTACCTTCGCCATCCGAGGTTTCGCAGCAAGCTTCCTTCGGTTCCAAGCAATTTCTTCAAGAGGCTACCGGCTCGAACAGATAGCATGCTTTGA 3261 0.4652 MKLVVEVIDAHDLMPKDGEGSASPFVEVDFENQLSRTRTVPKNLNPTWNHKLLFQFDSTKPYHHQSIEVSVYHERRPVPGRSFLGRVRIPCSNLVKEGEEVYQTYPLEKKWFFSPVKGEIGLKVYIASHSKPKISPSILISELEKLSPHTPLPQAPQSNTKNLSPTHFHSSPPSIATEDTVLTEETSESEPKEVTTSFDTSEQVTEESGIVNKEGETNLAARIQCSGSDTDQAPKQEKREPVPERAQQLHRHQVHQQPMISIKRRQRGTPAAAAMQSVNFPQQVHRSSHDHPSTLGNIPSSLDDHGSLDDEDYNVKDTNLQLGERWPNGGRGWMSGGERFSSTYDLVEQMFYLYVRVVKAKDLPPSTLTSSCDPYVEVKLGNYKGRTKHIEKKLNPEWNQVFAFSKDRIQSSILEVFVKDKDMLGRDDYLGRVIFDLNEVPTRVPPDSPLAPQWYRLEDRRGDGKVRGDIMLAVWMGTQADEAFSDAWHADAASVYGEGVFNIRSKVYVSPKLWYLRVNAIEAQDVIPSDRNRLPELFVKGQVGNQVLRTRICPTRTTTPVWNEDLVFVAAEPFEEQLTITVEDHLHPTKDEVLGKITLPMTLFEKRLDHRPVHSRWFNLEKYGFGMLEADRRKELKFSSRIHLRICLEGGYHVMDESTMYMSDQRPTARQLWKQPIGILEVGILGAQGLLPMKMKDSRGSTDAYCVAKYSQKWVRTRTILDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGSNAAARDSRIGKVRIRLSTLEANRIYTHSYPLLVLHPHGIKKMGELQLAVRFTTLSLANIFHIYGQPLLPKMHYLHPFTVNQVDNLRYQAMNIVATRLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLFSGMITMGQWFNQVCHWKNPISSVLVHILFLILIWYPELMLPTLFLYMFFIGLWNYRFRPRNPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSHDVVRMRYDRLRSVAGRIQTVVGDIATQGERFQSLLSWRDTRATSLFIVFSFCSAVVLYATPPRVVALVTGLYYLRHPRFRSKLPSVPSNFFKRLPARTDSML 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02848 1086 Gene3D C2 domain 502 648 IPR035892 -
Arst8g02848 1086 SMART C2_3c 352 449 IPR000008 -
Arst8g02848 1086 SMART C2_3c 515 615 IPR000008 -
Arst8g02848 1086 SMART C2_3c 2 103 IPR000008 -
Arst8g02848 1086 SMART C2_3c 679 783 IPR000008 -
Arst8g02848 1086 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1086 IPR047259 -
Arst8g02848 1086 MobiDBLite consensus disorder prediction 193 212 - -
Arst8g02848 1086 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1086 IPR047259 -
Arst8g02848 1086 CDD C2A_MCTP_PRT_plant 2 128 - -
Arst8g02848 1086 FunFam C2 domain-containing protein 347 493 - -
Arst8g02848 1086 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 128 IPR035892 -
Arst8g02848 1086 MobiDBLite consensus disorder prediction 232 251 - -
Arst8g02848 1086 MobiDBLite consensus disorder prediction 281 313 - -
Arst8g02848 1086 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 352 491 IPR035892 -
Arst8g02848 1086 MobiDBLite consensus disorder prediction 151 182 - -
Arst8g02848 1086 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 514 669 IPR035892 -
Arst8g02848 1086 FunFam C2 domain-containing protein 661 810 - -
Arst8g02848 1086 CDD C2C_MCTP_PRT_plant 515 667 IPR047258 -
Arst8g02848 1086 Gene3D C2 domain 652 807 IPR035892 -
Arst8g02848 1086 Gene3D C2 domain 348 493 IPR035892 -
Arst8g02848 1086 Gene3D C2 domain 1 137 IPR035892 -
Arst8g02848 1086 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Arst8g02848 1086 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 678 808 IPR035892 -
Arst8g02848 1086 ProSiteProfiles C2 domain profile. 495 618 IPR000008 -
Arst8g02848 1086 CDD C2D_MCTP_PRT_plant 679 803 IPR047255 -
Arst8g02848 1086 CDD C2B_MCTP_PRT_plant 352 478 IPR047257 -
Arst8g02848 1086 FunFam C2 domain-containing protein 501 648 - -
Arst8g02848 1086 ProSiteProfiles C2 domain profile. 334 455 IPR000008 -
Arst8g02848 1086 Pfam Plant phosphoribosyltransferase C-terminal 931 1086 IPR013583 -
Arst8g02848 1086 ProSiteProfiles C2 domain profile. 661 784 IPR000008 -
Arst8g02848 1086 Pfam C2 domain 352 455 IPR000008 -
Arst8g02848 1086 Pfam C2 domain 2 107 IPR000008 -
Arst8g02848 1086 Pfam C2 domain 514 620 IPR000008 -
Arst8g02848 1086 Pfam C2 domain 678 786 IPR000008 -
Arst8g02848 1086 MobiDBLite consensus disorder prediction 148 261 - -
Arst8g02848 1086 MobiDBLite consensus disorder prediction 281 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02848 Arst-Chr8 38862026 38865569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02848 2 1086 Lipid Metabolism Gene Families AT5G48060 68.128 0.0 1503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02848 - - lang:109333614 1799.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01270 6 12012409 12016376 Arst8g02848 8 38862026 38865569 ECH
Arst6g01271 6 12012409 12016376 Arst8g02848 8 38862026 38865569 ECH
Arst9g03980 9 115218904 115221812 Arst8g02848 8 38862026 38865569 ECH
Arst8g02848 8 38862026 38865569 Arst8g02848 8 38862026 38865569 ECH