Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02826 ATGAAGGAGATTGCAGTTGAATTCGAGAAACACAACGAATCTGATAAGGTGAAGGAGTTGGAAGATGCTGTTTTGGAGTTAGCTGATCTCTCTGAGGATAGTGTGCATCTTTCATCAGCAGTTCAAGCTATTGCAAACAGATACCAGCCAAAAGAAGAAGTTGTGAATAATTTTCGTAAGTTACTTGAGGATGAAGTGTCAAAATTGAAGGGCCAGTCTACTACTTCAGATCCTAATAGTAATCCTTTGGTTCGCCAATTTAAGGAAGCTGTATGGAAAGTTCATCATGAAGGGCAGCCAATGCCAGGAGAAGAGCAGGAGGACATTGTAATGACAAGTACCCAATCCAGTATTTTGAATATGACTTGCCCATTGACTGGAAAACCTGTTACTGAGCTTGAAGAACCAGTTCGCAGTGTGGAATGCAAGCATATTTATGAAAAGAGAATAATAATGCAATATATAAAGTCATCCAATCGATGTCCAATATCAGGTTGCCCGAAGAAATTGCGTGCAGATAGGGTGGTGCAGGATGCCTTGTTACTGATTGAGATTGAGGAATTGCGCAAAATGAACAAAGAAACTGAAGTGGAAGACTTTACTCTCCTTAATGAAGACGATTGA 624 0.4006 MKEIAVEFEKHNESDKVKELEDAVLELADLSEDSVHLSSAVQAIANRYQPKEEVVNNFRKLLEDEVSKLKGQSTTSDPNSNPLVRQFKEAVWKVHHEGQPMPGEEQEDIVMTSTQSSILNMTCPLTGKPVTELEEPVRSVECKHIYEKRIIMQYIKSSNRCPISGCPKKLRADRVVQDALLLIEIEELRKMNKETEVEDFTLLNEDD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02826 207 Pfam Zinc-finger of the MIZ type in Nse subunit 108 166 IPR004181 GO:0008270
Arst8g02826 207 SUPERFAMILY RING/U-box 121 170 - -
Arst8g02826 207 ProSiteProfiles Zinc finger SP-RING-type profile. 105 190 IPR004181 GO:0008270
Arst8g02826 207 PANTHER UNCHARACTERIZED 3 196 IPR026846 GO:0000724|GO:0019789|GO:0030915
Arst8g02826 207 CDD SPL-RING_NSE2 121 187 IPR004181 GO:0008270
Arst8g02826 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 201 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02826 Arst-Chr8 38700307 38703551 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02826 K22756 - gmx:100804379 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02826 8 38700307 38703551 Arst8g02826 8 38700307 38703551 ECH