Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02807 ATGTTAGGAAGTAAAAACAAAAGTTGCCATGGCAGTGCAGCAACAACAACACCTCTCTTATTAGGTGATAGAGAAGAAGTAGAAGATGCACAACATGAAGAATGGTGGAAGAGAATCTTGGATATGGATGAGGCAAAGCATCAACTACTGTTTTCACTGCCCATGATTGTTACAAACTTGTTGTATTACTTAATCACTTTGGTTTCAGTAATGCTTGTTGGTCACCTTGGTGACCTTCAGCTTGCTGGTTCCACTCTTGCCAACTCATGGTTCAGTGTCACTGGTGTCTCTCTCATGGTTGGTTTGAGTGGGGCACTAGAAACACTATGTGGGCAAGGATTTGGTGCAAAAGAATACCAAATGCTGGGAATTTATCTACAATCTTCATGCATCATATCCTTTGTTTTCTCCATCATCATATCCATAATTTGGTTCTACACACAACATATCTTAGTACTACTTCACCAATCCCAAGACATAGCAAAAACAGCAGCACTTTACATGAAGTTCTTTTTCCCAGGCTTATTTGCATATGGATTCTTGCAAAACATTCTTAGGTTTCTCCAAACACAATCTGTTGTGACACCATTGGTTATTCTCTCAGCTATCCCATTGTTGATCCACATTGGCATTGCATATGTATTAGTTGAGAAGACAGGTTTGGGTTTTGTTGGTGCACCTATTTCAGCTTCAATTTCACTATGGATAGCTATTGTTTTGTTGGCTTTGTATGTTATTTATGGAAAGAACTTCAAGTTGACATGGGAAGGGTTTTCTACTCAATCTTTTCATTATGTATTGCCTACCCTTAAACTTGCTCTGCCCTCTGCAGCAATGGTATGTTTGGAGTATTGGGCTTTTGAAGTCTTGGTTTTCTTAGCTGGAATAATGCCTGATTCAGAAATAACCACTTCCTTGATTGCAATATGTGCCAATACAGAATTCATTGCATACATGATCACTTATGGTCTCAGTGCTGCTGCAAGCACCCGAGTTTCGAACGAACTGGGAGCCGGCCACCCGGACCGGGCGAATCACGCCATGAGAGTGACTCTCACTCTCTCAGTTCTGCTTGGTTTGTGCTTTGTTTTGGCACTTGTGTTTGGTCATAATATATGGATTCAAATGTTCAGTAGCAGTTCTAAAATAAAGGAGGAGTTTGCTTCAATAACACCCTTACTTGCAATATCTATATTACTAGATGCTGTCCAAGGTGTCTTATCAGGGGTGATTAGAGGATGTGGTAGGCAGCACTTGGCTGCATATGTAAACCTTGCAACTTTTTATCTCATTGGTTTACCAATATCATGTCTCCTTGGATTTAAGACCAATTTGCAATTCAAGGGTTTATGGATAGGGTTGATTTGTGGGCTGGTTTGTCAAAGTGGAGCACTATTATTTTTCACATGGCGTGCCAATTGGTCCAAACTCCATCTCTCTCTGGACAAAATTAGACACAATGATCAACCAATTGTTGTTTAA 1482 0.4015 MLGSKNKSCHGSAATTTPLLLGDREEVEDAQHEEWWKRILDMDEAKHQLLFSLPMIVTNLLYYLITLVSVMLVGHLGDLQLAGSTLANSWFSVTGVSLMVGLSGALETLCGQGFGAKEYQMLGIYLQSSCIISFVFSIIISIIWFYTQHILVLLHQSQDIAKTAALYMKFFFPGLFAYGFLQNILRFLQTQSVVTPLVILSAIPLLIHIGIAYVLVEKTGLGFVGAPISASISLWIAIVLLALYVIYGKNFKLTWEGFSTQSFHYVLPTLKLALPSAAMVCLEYWAFEVLVFLAGIMPDSEITTSLIAICANTEFIAYMITYGLSAAASTRVSNELGAGHPDRANHAMRVTLTLSVLLGLCFVLALVFGHNIWIQMFSSSSKIKEEFASITPLLAISILLDAVQGVLSGVIRGCGRQHLAAYVNLATFYLIGLPISCLLGFKTNLQFKGLWIGLICGLVCQSGALLFFTWRANWSKLHLSLDKIRHNDQPIVV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02807 493 NCBIfam MATE family efflux transporter 54 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g02807 493 CDD MATE_eukaryotic 44 476 IPR045069 GO:0042910|GO:1990961
Arst8g02807 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 42 474 - -
Arst8g02807 493 Pfam MatE 54 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g02807 493 Pfam MatE 275 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02807 Arst-Chr8 38338038 38341662 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02807 K03327 - gmx:100816310 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02807 8 38338038 38341662 Arst8g02807 8 38338038 38341662 ECH