Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02726 ATGACCTACGCCGCCGGCCACCACCATAACGACACCGCCGACCTCTTCTACGAGTCCCTTGACAGGTTACTATCTTCCTCCGAATGCTCTACCTCCACCACCTCCGACACCGAGCAAGAACCGCCGCAACACCACCACCACAAGCCCGACGACGGAATTTACAATTATGCCCTCGCACTTAACAACAACTACGACCTCTGGATCTCTCATCCTTCCTCCGTCTCCGAGCGCCGTTCCTCCCTCCTCCGCCACCTCGGTCTCGCCGCTCCCTCGCCGCCGCGCGATAATGGGGACTCTTCCCGCTCCCCGTCGTCGGATCAGTTGACTGGACTGCGTCAGGGCTCCGCCGGAGGGATGCCCCGATCGAGCTCTGACGGTGCCGCGGATCCTCAGAATTCCGTTGGTGATGGTATTGATGATGATGATGAAAAGCCTTGTGGTTCTTGTTCGCTTTCTCGTTCTTCTTGTCGTTGTTGTCGTTCTTGTTCGTCTTCTTCTTCCATTCTTTCTATTCGTTCGGCCGTACCGGAGGCCGGAAAATCTGTAAATAGCCGGAATCGTCGCGGAGGCAGTGTTGGTGGTGGCGGTGGAAATGGCGGGTCCCCCTGGAAGCCTCCTTCGGGGAGGAATGGAAAAAGCGTGGATTTTGCAGAATTTGTGGTGAAAGAGTTTAGAGAAGATGGCATGTGGAACAAGTTCAGGGAGGTCGGCACTGGCCGGCAACTGACAATGGAGGAGTTCGAAATGACGGTCGGTCACTCGCCGATTGTCCAAGAGCTCATGAGGAGGCAGAATGTGGAGGAAAGCCATGGAAAGGACAATGTGGATTCAATTGGCAATGAAGGTGGCAAGGGAAACAATGGTTCCAAGTTGAAGAAGAGAGGGAACTGGTTGAGGGCCTTAAAATCCGCGATGGGGACACATAAGGAGCGGCGAAGCAGCGACGAGAGGGACACATCTTCGGAGAAGGGGGGGAGGAGGTCAAGCTCCGCCACGGATGACAGCCAGGATAATGCCTCATTCCATGGACCTGAGAGAGTTAAGGTTAGGCAGTATGGGAAGCCATGTAAGGAGGTCACAGCTCTTTACAAGAGCCAGGAGATTCAGGCTCATAATGGATCTATATGGAGTATTAAGTTTAGCTTAGATGGGAAATATTTAGCAAGTGCCGGCGAGGATTGTGTGATCCATGTGTGGCAGGTTGTGGAGTCTGAGAGGAAGGGGGAGCTGCTGATGGAAAAACATGAGGATGGGAATATGAACATGTTGTTTGTTGTCAATGGATCTTCGCTGGAGCCGAATCTGCTGTCCCCTCTCATGGACAAGTCACCTCTCTTGGACAATCATCATCCAGAGAGGAAGAGGAAGGGGAGGACATCCATTACCCGGAAATCGTTGAGCTTGGATCAATTAGTTATCCCGGATACCGTGTTTGCGCTCACCGAGAAACCCATTTGCTCCTTTCAGGGACATCTTCATGATGTGCTTGACCTCTCTTGGTCCAAATCTCAGCACTTGCTCTCATCTTCAATGGACAAAACGGTGCGGTTGTGGCATTTGTCTAGCAACTCTTGTTTGAAAGTTTTTTCACACAGTGACTTTGTAACTTGCATCCAGTTTAATCCTGTTGATGATAATTACTTCATTAGCGGATCCTTGGATGCTAAGGTTCGCATATGGAGCATTCCTGATAGGCAGGTTGTTGATTGGACTGATATGCATGAGATGGTTACTGCTGCTTGTTATACACCCGATGGTCAGAGTGCACTGGTTGGTTCTTACAAGGGCAGTTGCCACTTATATAACACATCAGAAAATAAGTTGCAACAAAAAAGTCAGATCAATCTGCAGAACAAGAAGAAGAAATCACATCTCAAAAAAATTACAGGTTTCCAGTTTGCCCCAGGAAGTTCATCAGAGGTACTTATCACATCTGCTGATTCACGAATTCGAGTTGTTGATGGTGTTGATCTGGTTCACAAGTTTAAAGGGTTCCGTAATTCGTCAAGCCAAATTTCAGCCTCTCTGACAGCCAACGGTAAATATATTGTCTCCGCGAGTGAGGATTCCCACGTGTACATATGGAAAAATGAAGCGGATTGTAGGCCTAACAGAAGCAAAGGTGTAACTATCACAGGCGCATACGAACATTTCCACTGTAAAGATGTTTCAGTGGCCATTCCATGGCCGGGTATGGGCGATGCCTGGGACATGCACGATACACTTTCTGGAGATCAAACTGAGATTGATAACAATGTGGATGAGGCCTTGTCCGCCAATCATCCTCCAACCCCCGTTGAGGAAAACTTTGGGTCCGAGGGTTCACGATCCACATCGGTTTACAGCAATAGTCCACGCCAGGCAACCATTGCAGGTGCCACAAACAGCTACTTTTTCGATAGAATTTCTGCAACATGGCCGGAGGAAAAACTTGTCGTGGCAGCCACAAAGAATCGAAGCCCTCGTATCAGCGGGGATTACTCAAACACAGGAAGTCAAAACATGTCAGCCTGGGGTATGGTGATTGTAACTGCCGGCCTTCGAGGCGAAATTAGAACTTTCCAAAATTTTGGATTGCCACTTCGGATATAA 2592 0.4942 MTYAAGHHHNDTADLFYESLDRLLSSSECSTSTTSDTEQEPPQHHHHKPDDGIYNYALALNNNYDLWISHPSSVSERRSSLLRHLGLAAPSPPRDNGDSSRSPSSDQLTGLRQGSAGGMPRSSSDGAADPQNSVGDGIDDDDEKPCGSCSLSRSSCRCCRSCSSSSSILSIRSAVPEAGKSVNSRNRRGGSVGGGGGNGGSPWKPPSGRNGKSVDFGXEFVVKEFREDGMWNKFREVGTGRQLTMEEFEMTVGHSPIVQELMRRQNVEESHGKDNVDSIGNEGGKGNNGSKLKKRGNWLRALKSAMGTHKERRSSDERDTSSEKGGRRSSSATDDSQDNASFHGPERVKVRQYGKPCKEVTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLMEKHEDGNMNMLFVVNGSSLEPNLLSPLMDKSPLLDNHHPERKRKGRTSITRKSLSLDQLVIPDTVFALTEKPICSFQGHLHDVLDLSWSKSQHLLSSSMDKTVRLWHLSSNSCLKVFSHSDFVTCIQFNPVDDNYFISGSLDAKVRIWSIPDRQVVDWTDMHEMVTAACYTPDGQSALVGSYKGSCHLYNTSENKLQQKSQINLQNKKKKSHLKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVHKFKGFRNSSSQISASLTANGKYIVSASEDSHVYIWKNEADCRPNRSKGVTITGAYEHFHCKDVSVAIPWPGMGDAWDMHDTLSGDQTEIDNNVDEALSANHPPTPVEENFGSEGSRSTSVYSNSPRQATIAGATNSYFFDRISATWPEEKLVVAATKNRSPRISGDYSNTGSQNMSAWGMVIVTAGLRGEIRTFQNFGLPLRI 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02726 864 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 529 563 - -
Arst8g02726 864 ProSiteProfiles Trp-Asp (WD) repeats profile. 489 529 IPR001680 GO:0005515
Arst8g02726 864 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 369 402 - -
Arst8g02726 864 FunFam WD repeat-containing protein 44 470 736 - -
Arst8g02726 864 ProSiteProfiles Trp-Asp (WD) repeats profile. 529 563 IPR001680 GO:0005515
Arst8g02726 864 Gene3D - 308 432 IPR015943 GO:0005515
Arst8g02726 864 MobiDBLite consensus disorder prediction 95 130 - -
Arst8g02726 864 Pfam WD domain, G-beta repeat 368 400 IPR001680 GO:0005515
Arst8g02726 864 Pfam WD domain, G-beta repeat 484 519 IPR001680 GO:0005515
Arst8g02726 864 Pfam WD domain, G-beta repeat 525 562 IPR001680 GO:0005515
Arst8g02726 864 Pfam WD domain, G-beta repeat 659 697 IPR001680 GO:0005515
Arst8g02726 864 PANTHER WD REPEAT DOMAIN 44 10 861 IPR040324 -
Arst8g02726 864 MobiDBLite consensus disorder prediction 83 144 - -
Arst8g02726 864 FunFam Transducin/WD40 repeat-like superfamily protein 326 431 - -
Arst8g02726 864 SUPERFAMILY WD40 repeat-like 364 699 IPR036322 GO:0005515
Arst8g02726 864 MobiDBLite consensus disorder prediction 179 214 - -
Arst8g02726 864 MobiDBLite consensus disorder prediction 27 51 - -
Arst8g02726 864 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 489 523 - -
Arst8g02726 864 MobiDBLite consensus disorder prediction 263 350 - -
Arst8g02726 864 MobiDBLite consensus disorder prediction 756 783 - -
Arst8g02726 864 MobiDBLite consensus disorder prediction 305 331 - -
Arst8g02726 864 MobiDBLite consensus disorder prediction 264 278 - -
Arst8g02726 864 Gene3D - 467 716 IPR015943 GO:0005515
Arst8g02726 864 PRINTS G protein beta WD-40 repeat signature 549 563 IPR020472 -
Arst8g02726 864 PRINTS G protein beta WD-40 repeat signature 388 402 IPR020472 -
Arst8g02726 864 PRINTS G protein beta WD-40 repeat signature 507 521 IPR020472 -
Arst8g02726 864 ProSiteProfiles Trp-Asp (WD) repeats profile. 369 410 IPR001680 GO:0005515
Arst8g02726 864 SMART WD40_4 564 603 IPR001680 GO:0005515
Arst8g02726 864 SMART WD40_4 523 562 IPR001680 GO:0005515
Arst8g02726 864 SMART WD40_4 362 401 IPR001680 GO:0005515
Arst8g02726 864 SMART WD40_4 610 655 IPR001680 GO:0005515
Arst8g02726 864 SMART WD40_4 656 697 IPR001680 GO:0005515
Arst8g02726 864 SMART WD40_4 482 520 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02726 Arst-Chr8 37613719 37619654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02726 486 655 Miscellaneous Gene Families AT5G08390 25.143 2.77e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02726 K20241 - qsa:O6P43_029073 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02726 8 37613719 37619654 Arst8g02726 8 37613719 37619654 ECH