Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02708 ATGGCAAACTTCCTCGCTCAGTTCCAATCCATCAAGAGTACCTCCGATCGCCTCGTCATTTCAGTCGAGGATGTGAGTGACTTGTGGCCGGCTGTCAAGCCTGCTTTTGAAGCACGGTTGCCGTTCAAGCAAGGGTCTTTGAATAACAAGACACGGAACCCTGTCTTAGTCGAGAAGTTGCCAGCTGAGTTCATATTAACTACAGATTCAAGGCTACGGAGCCGCTTCCCTCAGGAGCAGCTGTTATTTTGGTTTCGAGAGCCGTATGCAACTATTGTACTTGTTACCTGTGAGGATCTTGATGAGTTCAAAACGATCCTCAAACCACGTCTGAAATTAATTGTCCAAAATGATGAGAGAGAATGGTTTATTGTATTTGTATCTAGAGCTCATCCAGCAAATGATAAGGCAAGCGCAATGGCAAAAAAAGTATATGCCAAACTTGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAGTATGATATACATTTGCCTGAATCAAATTTTTGGGAAGATCTAGAATCAAAGATAATGGAGTGCATCAGAAATACACTGGATAAGCGTGTACAATTTTATGAGGAAGAGATAAGAAAGCTCAGCGAACAGCGGCTCATGCCAGTCTGGAACTTCTGTAATTTTTTCATTCTGAAGGAAAGCTTGGCGTTTATGTTTGAAATGGCACACCTCCATGATGATGCCTTACGGGAGTATGATGAACTTGAACTCTGCTATATTGAAACAGTTAACAACACTGGAAAGCAAAGAGACTTTGGAGGGGCAGACCATGGTGACGATCAAGCAGCATTGCTTAATCCAGGAAACAAAGCTTTGACGCAGATTGTCCAAGATGACTCATTCAGGGAGTTTGAATTTCGACAGTATCTATTTGCCTGTCAATCAAAGCTCTTATTCAAGCTAAATCGTCTATTTGAGGTTGCATCAAGAGGTTATTCGTTCATAATAAGCTTCTCAAAATCTTTGGCACTGCATGAGCGTATTCTGCCCTTTTGCATGCGTGAAACCTGGGTGGTAACTGCTTGCTTGGCTTTAATTGACGCAATACTTTCTAATTATAATGATGGACTTATGGCACCTGACATAGAGAAAAGGTTCTTTCATCTTCTAGGTGACCTATATTCGCTAGCAAGAGTGAAGTTCATGAGGCTTGCCTATTTAATTGGATATGGAACTGAAATTGAAAGAAGTCCTGTCAACAGTGCTGCTCTCAGCTTGCTATCTTGGCCTAAGCCAGCAGTTTGGCCTTCAGTTCCTGCAGATGCCTCAGCAGAGGTGCTTGAGAAAGAAAAGGTGATTCTTCAAACTACGTCTAGAACCAAGCCTTTTGGTATCCAGAGGAAGCCCCTGCCTCTTGAACCTACTGTGCTGCTGCGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGCATTTGAAACATTTGATGGTCGCCAGGGTATAACCGAAGGATCAGGTTTTGATGCATCCACAAGGATGTCGCCATCACAGAAAGTACCTCCAAGTTCCATACCGCGCACTAATTCTTCACCTGGAAACTTTGATGGCTCAATTGACCGGCCTATGAGGCTTGCTGAGATTTTTGTTGCTGCTGAGCATGCTTTGAAGAAAACAATTTCCAGCCAAGAACTGTTGAAATCATTATCATCATCTGAGGAATTTGAGCAAAAATATTTGGAGCTAACTAAAGGTGCTGCTGACAATTATCATCGTTCCTTGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATAGCAGCTGTCTCCTTTAAGCATGGGCATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTTTATTCCGGTGAAGGATGGCAGGACTTGTTGGCTGAGGTCCTCCCTAATTTAGCCGAGTGTCAGAAGATACTCAATGATCAAGCTGGTTACTTACTATCTTGTGTGAGGTTACTCTCTCTTGATGAAGGATTGTTTGAACGAGATGTATCATCATTAATAACATTTTCTGGAAATCCTGGACCACCGTTGGAGTTATGTGATAGGGATCCTGGTACCCTTTCTGTTACTGTTTGGAGTGGTTTTCCAGATGATATAACTCTTGATTCAATTAATCTTACGTTAGTGCCAACATCTAGTGTTGATGAAGGTGCAAAGGCATTGCAGAGTTCTACACCTAATGTGTTACATCCTGGTCGGAATACTATTACCTTGGATCTGCCACCCCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCAAAAATAGGTCCTGCAGATACTGATGATTTCATGAGTTACGAAAAGCCGGCTAAACCTATTTTGAAGGTGTTAAGGCCTAGAGCTCTGGTTGATCTTGATGCTGCTGTTTCCTCGCCTTTGTTAACAAATGAACGTCAGTGGATTGGTATTTTAGTTCGACCGATAAATTATTCCCTCAAAGGTGCTGTCTTGTATATTGATACTGGCCCAGGGTTGGAGATTGATGACTCGCATGTCATTGAGATGGAAACCTATGCTGGTGTATCAGAGAATGATGACAACAAGGTGCAGAAAGACGGTGCTCAGATAGACTCTTTAAATTATGAGAAGAAGGTTGAACGCTTGACTCTTCATAATGGAAAAATTGAGTTTCCAAATTGGGCAAGTGAGAGCCATGAGTGACATGCTCAGCAGAGGATCATCATCAGTTACAACTAGGAGAGAGAGCATTGTAGATGCCATGAGAACAATTGCTCTGAACCTTGAATTTGGAGTATACCACAATCAGATATTCGAAAGGACCCTGGCAGTTCATTTTACATATCCTTTCTATGTGACGACACGTGTAACCGATAAATGCAATGATGGTACATTGCTTTTGCAGGTTATACTTCACTCTGAAGTAAAGGCTACACTGACCATATATGATGCTTGGCTTGATCTTCAACATGGATTTATTCATAATGGTCAAACTGAGGGTAGACCTAGTTCAAGCCTCTTCCCACTAGTCATATCTCCTACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTTGGCAAGACAAATGGAGAAGAAGACAGAAAGCAGCAAGAAAGCATATTAAATATCAAATATGGAATTTCTGGTGATAGAACAATTGGAGCCCACCCTCCTGTCATGGATGAATCTACTAAAGTTGATGGTGCCAGACAGGAGTTGATCTTCAAGAATGCAATTACTTTGCAAAGGCCTGTGCTTGATCCATGCTTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGTCTAAGAGTTGGGCAACTAGTTAAGATGCAATGGAGGGTGGAAAGGTTAAAGGATTTGGATGAGAAAGAAGTTCCTGAACAGAATGATGAGGTTCTATACGAGGTAAAAGCGAATTCTGGAAATTGGATGATAGCTGGGAGGAAACGAGGGCATGTGTCGCTCTCCCCAAAACAAGGTGCAAGGATAATTATCTCAGTATTATGCATGCCACTGGTAGCTGGCTATGTTCGCCCGCCTCACCTTGGGCTACCAGACGTTGATGAAGCGAATGTAAGCTGCAAACCTGCTGGGCCGCATCTGGTTTGCGTTTTGCCCCCAGCTCTGAGCTCATCCTTCTGCATTCCAGTCAATTCATGA 3676 0.4266 MANFLAQFQSIKSTSDRLVISVEDVSDLWPAVKPAFEARLPFKQGSLNNKTRNPVLVEKLPAEFILTTDSRLRSRFPQEQLLFWFREPYATIVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSRAHPANDKASAMAKKVYAKLEVEFNTKKRERCCKYDIHLPESNFWEDLESKIMECIRNTLDKRVQFYEEEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYIETVNNTGKQRDFGGADHGDDQAALLNPGNKALTQIVQDDSFREFEFRQYLFACQSKLLFKLNRLFEVASRGYSFIISFSKSLALHERILPFCMRETWVVTACLALIDAILSNYNDGLMAPDIEKRFFHLLGDLYSLARVKFMRLAYLIGYGTEIERSPVNSAALSLLSWPKPAVWPSVPADASAEVLEKEKVILQTTSRTKPFGIQRKPLPLEPTVLLREANRRRASLSAGNAFETFDGRQGITEGSGFDASTRMSPSQKVPPSSIPRTNSSPGNFDGSIDRPMRLAEIFVAAEHALKKTISSQELLKSLSSSEEFEQKYLELTKGAADNYHRSLWKRHGVVLDGEIAAVSFKHGHFDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRLLSLDEGLFXERDVSSLITFSGNPGPPLELCDRDPGTLSVTVWSGFPDDITLDSINLTLVPTSSVDEGAKALQSSTPNVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKIGPADTDDFMSYEKPAKPILKVLRPRALVDLDAAVSSPLLTNERQWIGILVRPINYSLKGAVLYIDTGPGLEIDDSHVIEMETYAGVSENDDNKVQKDGAQIDSLNYEKKVERLTLHNGKIEFPNWASDTPSIIWVLVRAMSDMLSRGSSSVTTRRESIVDAMRTIALNLEFGVYHNQIFERTLAVHFTYPFYVTTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQHGFIHNGQTEGRPSSSLFPLVISPTSKAGILFSICLGKTNGEEDRKQQESILNIKYGISGDRTIGAHPPVMDESTKVDGARQELIFKNAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDLDEKEVPEQNDEVLYEVKANSGNWMIAGRKRGHVSLSPKQGARIIISVLCMPLVAGYVRPPHLGLPDVDEANVSCKPAGPHLVCVLPPALSSSFCIPVNS 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02708 1235 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1117 1203 IPR022233 -
Arst8g02708 1235 MobiDBLite consensus disorder prediction 494 525 - -
Arst8g02708 1235 Coils Coil 185 205 - -
Arst8g02708 1235 MobiDBLite consensus disorder prediction 486 528 - -
Arst8g02708 1235 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 9 666 IPR045126 GO:0048193|GO:1990071
Arst8g02708 1235 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 9 666 IPR045126 GO:0048193|GO:1990071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02708 K20307 - gmx:100787264 2152.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02708 8 37213984 37225533 Arst8g02708 8 37213984 37225533 ECH