LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g02567	ATGACTGTTACAGCTAATTCTGATCAACATGCATCATCTTACATTGCACGACCATGTGCAAATTTTCGTCCCAACATTTGGGGGGATATTTTCCTTCAATATCATAATTCACCATTGGATGTCGTGAATGAAAATATGAGGCAACAACTTGAAACATGTAAAGAGGAAGTGAAGAAGATTTTTCTATCTTCTAGCAATAATATCTCACAAAAATTAAACATCATTGACTCAATGCAACGTTTGGGTATATCTTATCATTTTGAACGTGAAATTGACCAAGCATTAGAACAAATCCAAAAGATTTCCATCAATAATGCACTCGACATAGAAGAAGGTGACCTACACTCTATTGGATTACTCTTTAGATTGCTTAGACAAAAAGGATATCACATTTCATCAGACATATTCAACAAATTCAAGAATAAGGAGGGAAAGTTCAATGAAACCATTGTGGAAGATGTTGAAGGATTATGGAGTTTGTATGAGGCAACACAATTAAGCACTCATGGTGAAGATTCAATAGATGAAGCACATGATTTTGCTTACACTAACCTCAAGTCCATGATCACCAAAAATAAGTTGAGCACATATCTTGCTAAGCAAATTGATCAAAGCTTAACGCTACCAATTCACAAGGGAGTTCCAAGGATAGAGACAAGACGTTACATGTCCTTCTATGAAGAGGATCCTTCTCATGACAGAGTCCTTCTACGTTTTGCAAAATTAGATTTTAATGTTTTACAGAAAATGCATCAAAAAGAACTTGGAAATATCACAAGGTGGTGGAAAGAATCAGATTTTGCAACTAAGGTTCCCTATGCTAGAGAAAGGGTGGTTGAGGCATACCTTTGGCCATTTTCTATGTCTTCAGAGCCTAAATGTAGCACTCACAGAAGGATTGTTGGCAAATTGATTTCATGTATTTGTCTTCTTGATGATACTTATGATGCCTATGGCACTCTTCAAGAACTTGAACTCTTCACACAGGCAATCAAAAGATGGAATGCTAATCCTATCAAATCTCTTCCAACATGTTTCAAAGTGGTATTTACCGCAATTTTAGAAGTGGTGGATGAAATTGAATCAGCAGTAGTAGATGCGAAAAAATCAACCCTAGTGTCGAAACATGTTAAACAAGCGTTTCTGAATTTGGCTGAAGCTTACTTGTTGGAAGCAAAATGGTGCAATGAGGATTATGTTCCAACTTATGATGAATACAAGGTTAATGGAGCTATGTCTTCTTCATTGCAACTTCACATAGTAGCATTTGTTGGTCTTGGTGAATTTGCAACCAAAGAAGTCTTTGATTGGATATTTAGTGATCCAACAACAATTATAAAAGCTGTATCACTTGTTGGCAGACTCAAGGATGATCTGGCTTCACATAAGTTTGAGCGGGAAAGAGATCATCATGTTGCTTCAGCAGTTGAATGTTGCATGAAGCAATATGGAATTTCACAAGAAGAGACATACAAACTCATTCAAAAGGAAATCAAAGATTTTTGGAAGGATATAAATGAAGTGTGCCTCAATCCAAATAATCATATTCCAAAGGCAGTGCTTGAGTGTGTTGTTAATTTGGGACGTATATCTGAGTTCACATATGCAAACTTTCAAGATAGATTCACAAACGGAGAATTTATGAAAGAATGCGTTTCTGAACTACTTTTAGATCCCATCGCTATTTACTAG	1692	0.3605	MTVTANSDQHASSYIARPCANFRPNIWGDIFLQYHNSPLDVVNENMRQQLETCKEEVKKIFLSSSNNISQKLNIIDSMQRLGISYHFEREIDQALEQIQKISINNALDIEEGDLHSIGLLFRLLRQKGYHISSDIFNKFKNKEGKFNETIVEDVEGLWSLYEATQLSTHGEDSIDEAHDFAYTNLKSMITKNKLSTYLAKQIDQSLTLPIHKGVPRIETRRYMSFYEEDPSHDRVLLRFAKLDFNVLQKMHQKELGNITRWWKESDFATKVPYARERVVEAYLWPFSMSSEPKCSTHRRIVGKLISCICLLDDTYDAYGTLQELELFTQAIKRWNANPIKSLPTCFKVVFTAILEVVDEIESAVVDAKKSTLVSKHVKQAFLNLAEAYLLEAKWCNEDYVPTYDEYKVNGAMSSSLQLHIVAFVGLGEFATKEVFDWIFSDPTTIIKAVSLVGRLKDDLASHKFERERDHHVASAVECCMKQYGISQEETYKLIQKEIKDFWKDINEVCLNPNNHIPKAVLECVVNLGRISEFTYANFQDRFTNGEFMKECVSELLLDPIAIY	563

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g02567	563	FunFam	Isoprene synthase, chloroplastic	216	550	-	-
	Arst8g02567	563	Gene3D	-	66	232	IPR036965	GO:0010333\|GO:0016829
	Arst8g02567	563	PANTHER	OS04G0344100 PROTEIN-RELATED	18	544	-	-
	Arst8g02567	563	SFLD	Terpene Cyclase Like 1 C Terminal Domain	234	561	IPR034741	-
	Arst8g02567	563	SFLD	Terpene Cyclase Like 1 C Terminal Domain	234	561	IPR034741	-
	Arst8g02567	563	Pfam	Terpene synthase, N-terminal domain	26	206	IPR001906	GO:0010333\|GO:0016829
	Arst8g02567	563	CDD	Terpene_cyclase_plant_C1	17	559	IPR044814	GO:0010333\|GO:0016102
	Arst8g02567	563	FunFam	Isoprene synthase, chloroplastic	66	232	-	-
	Arst8g02567	563	Pfam	Terpene synthase family, metal binding domain	237	504	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Arst8g02567	563	Gene3D	Farnesyl Diphosphate Synthase	24	545	IPR008949	-
	Arst8g02567	563	SFLD	Isoprenoid Synthase Type I	234	561	-	-
	Arst8g02567	563	SFLD	Isoprenoid Synthase Type I	234	561	-	-
	Arst8g02567	563	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	24	232	IPR008930	-
	Arst8g02567	563	SUPERFAMILY	Terpenoid synthases	232	561	IPR008949	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g02567	Arst-Chr8	35026773	35029814	Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g02567	K15803		K23172	gmx:100781367	634.409

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst8g02567	8	35026773	35029814	Arst8g02567	8	35026773	35029814	ECH