Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02547 ATGCAGCTTCACATATCACCAAGTTTAAGACATGTAACTGTGCTACCAGGAAAAGGGTTGAAGGAATTCATCAAAGTGAAGGTTGCGTCGCGGCGAGTCTCTTATAGGATGCTCTTCTATTCACTCCTGTTCTTCACATTCCTTCTCAGGTTTGTGTTTGTTTTGACATCAGTGGATGGCATTGATGGAGGAGAAACCAAGTGCTCTACCATAGGTTGCTTGGGAAAAAAACTGGGGCCAAAACTTATGGGGAAAAAGACTGAATCAAATGTGCCAGACGTAATATACCAAACATTAGATGCACCCCTTGACAAAGATGAGCTAAGGGGAAGATCTGATATTCCACAGACTTTAGAAGAGTTCATGACAGAAGTTAAGAAAGGTGGATTTGATGCCAAGACATTTGCTGTTAAACTCAGAGAAATGGTGACCCTTATGGAACAAAGGACCCGAAATGCAAAAATCCAAGAATATCTATATCGCCATGTAGCATCGAGCAGCATACCAAAACAACTTCACTGCCTTGACTTGAGGCTGGCCAGCGAGCACACCAACAACGCGGCAGCACGGCTTCAGCTACCCTCTGCAGAATTAGTCCCTGCCCTGGTTGACAATTCCTACTTCCACTTTGTCCTTGCCTCAGACAATGTTCTGGCTGCTTCGGTTGTTGCAGCATCGCTTGTCCGCAACTGTTTGCGGCCCCAGAAAGTTGTTCTGCACATAATTACAGATAAAAAGACTTATTATCCCATGCAGGCATGGTTCTCCTTGCACCCTTTATCACCTGCTATAATTGAAGTCAAAGCATTGCATCATTTCGATTGGTTTACAAAGGGTAAGGTGCCTGTGCTGGAAGCAATGGAGAAAGACCAGAAGGTGCGATCACAGTTTAGAGGAGGATCATCAGCTATAGTAGCAAATACCACTGAGAAGCCACAAGTTATTGCAGCAAAGCTACAAACACTTAGTCCCAAGTATAATTCAGTGATGAACCATATCCGAATACATCTTCCAGAGTTGTTTCCAAGCCTTAACAAGGTGGTCTTCCTCGACGATGACATAGTAATACAAACTGATCTTACGCCTCTGTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGTACTGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTCTCTCACCCTCTCATATTGAAAAACTTCAATCCGAACGAGTGCGCCTGGGCTTATGGAATGAACATTTTTGACTTGGAGGCTTGGAGGAAAACCAATATAAGCTTTACATACCACCATTGGGTTGAGCAGAATATAAAATCAGACCTGAGCCTGTGGCAGCTAGGCACATTACCTCCTGGGTTGATTGCATTTCATGGCCATGTTCACATTATTGATCCTTTCTGGCATATGCTGGGATTGGGATATCAAGAAGACACAAGTTTTGCTGATGCTGAGAGTGCCGGTGTCATCCATTTCAATGGCAGGGCGAAGCCATGGCTAGACATAGCTTTTCCACAACTGAGGCCATTGTGGACTAAATATGTTAACTTTTCAGATAAATTCATCAAGAGCTGTCACATTAAGGCATCATAG 1605 0.4336 MQLHISPSLRHVTVLPGKGLKEFIKVKVASRRVSYRMLFYSLLFFTFLLRFVFVLTSVDGIDGGETKCSTIGCLGKKLGPKLMGKKTESNVPDVIYQTLDAPLDKDELRGRSDIPQTLEEFMTEVKKGGFDAKTFAVKLREMVTLMEQRTRNAKIQEYLYRHVASSSIPKQLHCLDLRLASEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVAASLVRNCLRPQKVVLHIITDKKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTTEKPQVIAAKLQTLSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLTPLWDIDMNGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLILKNFNPNECAWAYGMNIFDLEAWRKTNISFTYHHWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQEDTSFADAESAGVIHFNGRAKPWLDIAFPQLRPLWTKYVNFSDKFIKSCHIKAS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02547 534 Pfam Glycosyl transferase family 8 211 507 IPR002495 GO:0016757
Arst8g02547 534 CDD GT8_like_1 208 520 - -
Arst8g02547 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 100 531 IPR029993 GO:0047262
Arst8g02547 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 209 531 IPR029044 -
Arst8g02547 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 210 528 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02547 Arst-Chr8 34818551 34822069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02547 1 534 Glycosyltransferase AT5G54690 80.561 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02547 K20867 - gmx:100812550 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02547 8 34818551 34822069 Arst8g02547 8 34818551 34822069 ECH