Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02546 ATGGGGATGAGGAGTGATTCACAGAAACAACAAGTTCTTCATCAGGGTGTTGGTGGTGGTGCTGCTGCTGCTGTTGGTAGAACCAATGGCTTTATTCCCAGCTCCTTTCGTGCTATCTCTAGCTACCTAAGGATTGTTTCCTCTGGAGCTTCAACTGTCGCCCGCTCGGCTGCATCAGTTGCTTCATCAATTGTTGATAGGGATGATGATGCTGACCATGATCAGGTAATCTGGGCGGGATTTGACAAGTTGGAGAGCAAGGGTGGAATCTTGCAGCAGGTACTTCTTCTAGGCTATCGTTCTGGCTTCCAGGTTTGGCATGTTGATGAATCAAACAATGTATGTGACGTGGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGGTTCCAAATCCAATTGCATCAAAGAGATCAGAAGACAAGTTTGCAAATAGCCGCCCACTGCTGGTAGTTTGTACCGATGGATTCTTTGCCAATGGTACCAATGTTCAGGATGGGTCAAATGCCCCTTACAATGGGGGCACTTCGAACTCACATGACCAAATGAATGGCAACTATCTGCCAACCACTGTTCAGTTTTATTCTATGAAATCCCATGCTTATGTCCATGTACTGAAATTTAGATCAGTTGTCTATTCGGTGAGGTGCAGTTCTCGAGTAATTGCTGTAGCTCAATCCACTCAGATACACTGTTTTGATGCTACATCTTTAGAAAGGGAATATACGTTACTTACCAATCCTATAGTCATGAGCTGTCCCGGTTCTGGTAGCATAGGCTACGGACCACTTGCAGTGGGTCCAAGATGGCTAGCATATAGTGGAAGCCCGGTTGGAGTCTCTGCCTCTGGGCATGTCAGCCCACAACAGCTGACACATTCTTCAAGCCTTCCTGGTTATTCTTCAAATGGGAGCTTAATTGCGCACTATGCCAGAGAGTCCAGCAAGCAGCTTGCTTCAGGAATTGTGACCCTTGGAGATATTGGATACAAGAAACTTTCCAGATACTACTCTGATAACAACGGTTCATTACAATCTGTAAATTCTGGCCCAAAGGGCAATGGAATCATTAATGGCCATTCAACAGATGCCGATAACATTGGAATGGTCATTGTTAGAGATATTGTTACAAAAAACGTCATCACCCAATTCCGGGCCCACAAGAGTCCCATTTCTGCTCTATGCTTTGATCCTAGTGGCACCATATTAGTGACTGCTTCAGTCCAGGGGCATAATATCAATGTTTTTAAGATAGTTCCCGGACATGAAAATTCATCAGTATCTGACGCTGGTCTTTCCTATGTTCATCTATACAGGCTACAACGTGGCTTCACAAATGCGGTTATACAAGATATCAGTTTTAGCAATGATAGCAAGTGGATTATGATTAGTTCCTCAAGGGGCACTAGCCATCTATTTGCGATAAATCCTCAAGGAGGATATGTAGATATTCAATCTTATGATGATAATCCTATGCCAAAAAATAATGGAATGGGAGTTATGACTAATCAAGCAATGCGCAGGTCTCATAGTTCAGTAGTGCCTCAGCAGCAGAGCCTTATCGCCTCTGGGCCTCCAATCACACTTTCTGTAGTAAGCAGAATTAGGAATGGAGCTAATGGCTGGAGAGGAGCGGTAAGTGGTGCTGCCGCAGCTGCAGCTGGGAGGAAGAGTTTGCTCTCTGGTGCTATTGCTTCATCTTTCCGTAATGCCTTATATGTTGACGGGAACCATTCCAAGGCAAAGAATCATCTTTTGGTCTTTTCACCTACTGGGTCCATGATACAATATGCTTTGCGGACAATAAATGGTCAAGATTCGACCATTGTTTCGGGAATAACCCCGGCTTATGAATCCATTCCGCAAACTGAGGCAAGATTAGTAGTGGAAGCTATCCACAAGTGGAATATATGTCAGAGACATAGTCGGAGAGAAGATAATGTTGACATATATGGCGAGAGTGGAATTTCCGATAGCAACAAAATATATCCTGAGGAAGTGAAGGCCGACAACGTCGTCAGCCCTAAAATCAAGAATGGGGTAAAGAAAATGAATCTCTCTCTTGAGGAACAGCATCATTTGTATATTTCAGAAGCTGAATTGCAAATGCATCCTGCTCAGAGACCATTGTGGGCAAACCCAGAGATATATTTTCATTCAATATCAAAAGAATCTGCCATAATGAATGAAGCAGCATCTTCAGGAGGCGAATTTGAGATTGAAAAGCTTCCAAGTCGCATGATTGAATCTAGGTCGAAAGACTTGATTCCAATTTTTGACTATATACAGACCCCGAGAGTGCAACAAACAAGGACTACTGCTACAGATAACAAGACTAATGAACAACTGTCACGTCAAACTTCATCACTGTCTAATAATGGCAGGATTTCACCCGGTGCTGTTTTGGGATCTCCTGAATATGTTACCGATTCTGTTGGCGATGTTGCTGAATTTAAAAGCGAGTCTGAAGGAACCGAGTGGGATGCTCATTTTGCGCTGCCTGAAATGGGGGCCTTTGTAAATAGCAATGACACTGTCAAACCAAATACTCAGCATGAGATTGTAAATAATATAAAGGAGCATCTAAACATGGAGGCCCAGCTCATGTATGTAAATAGTAACACAAGGCCTCTGAATGAAGAATCATTTTAA 2655 0.4316 MGMRSDSQKQQVLHQGVGGGAAAAVGRTNGFIPSSFRAISSYLRIVSSGASTVARSAASVASSIVDRDDDADHDQVIWAGFDKLESKGGILQQVLLLGYRSGFQVWHVDESNNVCDVVSRHDGPVSFMQMVPNPIASKRSEDKFANSRPLLVVCTDGFFANGTNVQDGSNAPYNGGTSNSHDQMNGNYLPTTVQFYSMKSHAYVHVLKFRSVVYSVRCSSRVIAVAQSTQIHCFDATSLEREYTLLTNPIVMSCPGSGSIGYGPLAVGPRWLAYSGSPVGVSASGHVSPQQLTHSSSLPGYSSNGSLIAHYARESSKQLASGIVTLGDIGYKKLSRYYSDNNGSLQSVNSGPKGNGIINGHSTDADNIGMVIVRDIVTKNVITQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIVPGHENSSVSDAGLSYVHLYRLQRGFTNAVIQDISFSNDSKWIMISSSRGTSHLFAINPQGGYVDIQSYDDNPMPKNNGMGVMTNQAMRRSHSSVVPQQQSLIASGPPITLSVVSRIRNGANGWRGAVSGAAAAAAGRKSLLSGAIASSFRNALYVDGNHSKAKNHLLVFSPTGSMIQYALRTINGQDSTIVSGITPAYESIPQTEARLVVEAIHKWNICQRHSRREDNVDIYGESGISDSNKIYPEEVKADNVVSPKIKNGVKKMNLSLEEQHHLYISEAELQMHPAQRPLWANPEIYFHSISKESAIMNEAASSGGEFEIEKLPSRMIESRSKDLIPIFDYIQTPRVQQTRTTATDNKTNEQLSRQTSSLSNNGRISPGAVLGSPEYVTDSVGDVAEFKSESEGTEWDAHFALPEMGAFVNSNDTVKPNTQHEIVNNIKEHLNMEAQLMYVNSNTRPLNEESF 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02546 884 SMART WD40_4 434 475 IPR001680 GO:0005515
Arst8g02546 884 SMART WD40_4 378 418 IPR001680 GO:0005515
Arst8g02546 884 Gene3D - 90 476 IPR015943 GO:0005515
Arst8g02546 884 FunFam Breast carcinoma-amplified sequence 3 301 525 - -
Arst8g02546 884 MobiDBLite consensus disorder prediction 768 799 - -
Arst8g02546 884 SUPERFAMILY WD40 repeat-like 192 478 IPR036322 GO:0005515
Arst8g02546 884 Pfam Breast carcinoma amplified sequence 3 525 758 IPR022175 -
Arst8g02546 884 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 11 805 IPR045142 GO:0006914
Arst8g02546 884 MobiDBLite consensus disorder prediction 768 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02546 Arst-Chr8 34801471 34807778 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02546 - - gmx:100784596 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02546 8 34801471 34807778 Arst8g02546 8 34801471 34807778 ECH