Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02259 ATGTTGTCTCATGGAGTATATAGTTCCGGAACCACAGAAGGAAGGCAGAAATTTGTTCCATTCACGAGGCACAGTGCACAAACAACCCTTGAAACTTTCACTTTATCTGCAGCATATAGGTCAAGGGTTTATCCAATAAGGGAAGGAGGTAAGATTCTTGAATTCATATACAGCGGCAACCAATTCAAAACAAAAGGAGGGTTAATTGCAGGAACCGCCACAACACACTACTATGCAAGTGAGGAGTTCAGGATCAAACAGGAGAGAACTAAGTCATTCACTTGCAGCCCCTATGAGGTTATCTCCGCCGGTGACTACAAGCAATCCACCTACTGCCACCTCCTCCTCGGCCTCTTCTTCTCTCATGATGTCGAATTCATCACCTCTGCCTTCGTCTATGGCATCGTCCAAGCCTTTCGCAGCTTCGAAGAGCTCTGGAGAGACTTGTGCAATGACATTAGACACGGCACCTTAAGTTCTAGAATAAAGGTACCAAAAATGAGAGAGGCGGTGTTGGAAATCATAACAGCAAACCAAAGTTTGGCATCAAGAATAGAAGGGATATGCGAGGAGGTAGAAGTGATGGATTGGTTTGGTTTGATTCCAAAGTTATGGCCAAATGCAAAGTACGTGTATTCCATAATGACAGGTTCAATGCAACCATATTTGAAGAGGCTAAGGCACTATGCAAATGGGTTACCATTGGTGAGTGGTGACTATGGTTCAAGTGAGAGCTGGATTGGGGTTAATGTGGATCCAAGTTCACCACCAGAGAGTGTCACATTTGCTGTGGTTCCAACTTTCTCTTACTTTGAGTTCATACCACTTTACAGACACAAACATAGTTGCGGTTCCTCTCATGATGCTGCTGCTGATGATGATTTCGTTGAAGACAAGCCAATCCCACTATCTAAGGTTAAAGTTGGACAAGAGTACGAAATTGCACTCACCACTTTCACTGGACTGTACAGGTGCAGATTGGGAGATGTAGTAGAAGTTGGTGGATTCCACAATGGGACTCCAAAACTTAACTTCATATGCAGAAGGAAACTGATCCTAACAGTGAACATAGACAAGAACACAGAGAAGGACCTCCAAGCAGTAGTGGAGAAAGCCTCTTACATCCTCCAATCACAAACAAACAACAACGCCGAGCTTGTTGACTTCACAAGCTACGCCGACCTAACAACCCAACCCGGCTGCTACGTCATTTTCTGGGAGATCAAAGGAGACGCACACGACCATGTGCTTCAATCTTGTTCCACTGAAATGGACGCTGCCTTTGTTGACTATGGCTACGTGGTTTCCAGGAAAACAAGCTCCATAGGGCCATTGGAGCTTTGCATTGTGGAGAAGGGTACGTTTAAGAAGATTCTGGATTGTTTTGTTGCAAATGGTGCCACTTTGGGACAGTTCAAGACTCCTAGGTGCACCAATAACCCTCTCTTGCTCAACATTCTTCATGCATGCACCCTTAAGATTTTTCGCAGCACTGCTTATGCTTAA 1506 0.4469 MLSHGVYSSGTTEGRQKFVPFTRHSAQTTLETFTLSAAYRSRVYPIREGGKILEFIYSGNQFKTKGGLIAGTATTHYYASEEFRIKQERTKSFTCSPYEVISAGDYKQSTYCHLLLGLFFSHDVEFITSAFVYGIVQAFRSFEELWRDLCNDIRHGTLSSRIKVPKMREAVLEIITANQSLASRIEGICEEVEVMDWFGLIPKLWPNAKYVYSIMTGSMQPYLKRLRHYANGLPLVSGDYGSSESWIGVNVDPSSPPESVTFAVVPTFSYFEFIPLYRHKHSCGSSHDAAADDDFVEDKPIPLSKVKVGQEYEIALTTFTGLYRCRLGDVVEVGGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQAVVEKASYILQSQTNNNAELVDFTSYADLTTQPGCYVIFWEIKGDAHDHVLQSCSTEMDAAFVDYGYVVSRKTSSIGPLELCIVEKGTFKKILDCFVANGATLGQFKTPRCTNNPLLLNILHACTLKIFRSTAYA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02259 501 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 500 IPR004993 -
Arst8g02259 501 Pfam GH3 auxin-responsive promoter 8 480 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02259 Arst-Chr8 31699446 31706341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02259 6 498 EF-hand Containing Proteins AT1G23160 35.897 5.46e-97 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02259 K14487 - gmx:100814683 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02259 8 31699446 31706341 Arst8g02259 8 31699446 31706341 ECH
Arst8g02259 8 31699446 31706341 Arst3g01760 3 20527438 20535683 PCT