LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g02185	ATGTCTACAGATCAAATGGCTCTTGTTATACAAGTTAGAGCTTCTTCGCTTTCAAGCTCAATTCATCATCCTCGACACAATTCCATGCATCCACCATGGAACTTGTCGCTACAAACATCTAAAGGCCAAGGGACCATTATGCTTAGTAAAAAATTATCCATCAATTCCGTTCTTCTTCGTGAGAAGGTGGAGTGTCTTGAAAGTAATGATAGGAAGAAAAGCTTGGAGCAGGTGAAGAAAGAAGGGCAAGAAGCATTGCTAAAAAAGTCAAGTGATCCGGTGGGAACAATGAAAATAATTGATAGCATTCAAGAGCTGGGAATTGGGCACCATTTTGAAGAAGAGATTAATGCACTTCTTGGAAAGATATGCCACTGGGATGCCTCACAAGACCTATTTGCCACATCCCTTCAATTTCGCCTCCTCAGGCACAATGGCTGGACCACGTTTCCTGAGAATTTCAACAAGTTTTTGGACAAGAGTGGAAATTTCAAGGAATCACTGAGCAGAGACATAGGTGGCGTGCTAAGTTTGTACGAGGCATCATTTCTAGGTGCTGAAGGTGAAGGAGTGTTACAACAAGCCATGGACTTCTCAAGAGGCCATCTTCACCAATCAATCCCTCACATGGCTCCTGAATTAGGAAGACAAGTTAGCAGAGCCTTAAGGCTTCCAAGGCACCTTCAAATGGAGAGGTTAGAAGCCAAGAATTACATGGACCAATACAGCCGTACAACAACCAAAATACCAGCTCTTTTGGAATTGGCCAAGTTGGATTATGACATGCTTCAATCATTGTACAAAAGAGAATTAGGAGAAATCACCAGGTGGTGGAAGGAATTAGGACTAATTGAGAGCCTTGGTTTTGCTAGAGATAGACCGTCAGAGTGCTTTCTATGGACAGTGGGGATTTTCCCAGAACCACGTTATTCCAACTGCCGTATTGAACTTACTAAAACAGTATGCATTTTGCTTGTTATGGATGATATCTTCGATACTTATGGCTCTTTCGATGATCTTGTTCTTTTCGTCAAGGCAATCAAAAGATGGGATCTTGATGCAATGGAGCAGCTACCTGAATACATGAAAATATGCTACATGGCATTATATAACACAACTCACGAAATTGCATACAAAATTCAGAAAGAGCGTGGACTAACCGCTGTTGCCTACTTGAAAAAAACGTGGATAGACATATTTGAAGCATTTCTTGAGGAAGCCAAATGGTTCAACCAGGGTTACGTGCCATCTTTTAGGGAATATCTGGACAACGGGGTGATTTCCGCAGGATCTTACATGGCCATGACGCATGCAACTTTCCTCGTTGGTGATGGTATCTCAAAGGATACTCTTTCATTGATGAAGACATATCCTAGGCTCTTCTCTTGTTCTGGCGAAATTCTTCGTTTTTGGGACGACCTAGGAACTTCAACGGAAGAACAAGAGAGAGGGGATAATGCTTGCAGCATACAGTGCTACATGAGGGAAAATAATGGTTGTGATGAGAATGAAGCAAGAAAACATATAAGGGGGCTCATAGGGAAGCTGTGGTTAGAGTTGAATGGTGTAGCCATGAACACGACCGCTCTGCCTTCTTCAATAGTGAAAGCTTGTTTCAACATGGCAAGAACTGCTCAGGTCATATATCAGCATGGCGATGACAAAAGCACATACACAGTTGATGACTACGTCCAAACATTGTTCTTCACACCCTCTGCTATCTAG	1725	0.4238	MSTDQMALVIQVRASSLSSSIHHPRHNSMHPPWNLSLQTSKGQGTIMLSKKLSINSVLLREKVECLESNDRKKSLEQVKKEGQEALLKKSSDPVGTMKIIDSIQELGIGHHFEEEINALLGKICHWDASQDLFATSLQFRLLRHNGWTTFPENFNKFLDKSGNFKESLSRDIGGVLSLYEASFLGAEGEGVLQQAMDFSRGHLHQSIPHMAPELGRQVSRALRLPRHLQMERLEAKNYMDQYSRTTTKIPALLELAKLDYDMLQSLYKRELGEITRWWKELGLIESLGFARDRPSECFLWTVGIFPEPRYSNCRIELTKTVCILLVMDDIFDTYGSFDDLVLFVKAIKRWDLDAMEQLPEYMKICYMALYNTTHEIAYKIQKERGLTAVAYLKKTWIDIFEAFLEEAKWFNQGYVPSFREYLDNGVISAGSYMAMTHATFLVGDGISKDTLSLMKTYPRLFSCSGEILRFWDDLGTSTEEQERGDNACSIQCYMRENNGCDENEARKHIRGLIGKLWLELNGVAMNTTALPSSIVKACFNMARTAQVIYQHGDDKSTYTVDDYVQTLFFTPSAI	574

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g02185	574	SUPERFAMILY	Terpenoid synthases	250	571	IPR008949	-
	Arst8g02185	574	Pfam	Terpene synthase family, metal binding domain	253	517	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Arst8g02185	574	FunFam	Isoprene synthase, chloroplastic	226	564	-	-
	Arst8g02185	574	PANTHER	OS04G0344100 PROTEIN-RELATED	77	557	-	-
	Arst8g02185	574	CDD	Terpene_cyclase_plant_C1	55	571	IPR044814	GO:0010333\|GO:0016102
	Arst8g02185	574	Pfam	Terpene synthase, N-terminal domain	71	222	IPR001906	GO:0010333\|GO:0016829
	Arst8g02185	574	Gene3D	-	91	248	IPR036965	GO:0010333\|GO:0016829
	Arst8g02185	574	Gene3D	Farnesyl Diphosphate Synthase	68	557	IPR008949	-
	Arst8g02185	574	SFLD	Isoprenoid Synthase Type I	251	571	-	-
	Arst8g02185	574	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	71	245	IPR008930	-
	Arst8g02185	574	SFLD	Isoprenoid Synthase Type I	251	571	-	-
	Arst8g02185	574	SFLD	Terpene Cyclase Like 1 C Terminal Domain	251	571	IPR034741	-
	Arst8g02185	574	SFLD	Terpene Cyclase Like 1 C Terminal Domain	251	571	IPR034741	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g02185	Arst-Chr8	30683381	30686774	Dispersed/Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g02185	-		-	gmx:100807904	806.979

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst8g02185	8	30683381	30686774	Arst8g02185	8	30683381	30686774	ECH
	Arst8g02185	8	30683381	30686774	Arst3g01651	3	18829043	18830443	PCT