Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01857 ATGTACAAGAACCAGCTGCAGGAGCTGGCGCAGCGGAGTTGCTTCAACCTGCCGTCGTACACGTGCATTCGGGAAGGTCCCGATCACGCTCCGAGGTTTAAGGCGACGGTGAACTTTAACGGCGAGACCTTCGAGAGCCCTCACTACTGCTCAACGCTACGCCAGGCTGAGCACTCCGCCGCCGAGGTCGCACTCAACTCCCTCTCTCACCGTGGCCCCTCTCACTCCCTCGCCGCTAAGATCCTCGATGAAACTGGAGTATACAAGAACCTCTTACAGGAAATTGCACAAAGGGTAGGGGCACCATTGCCTCTGTACACAACATACAGGTCAGGCTTAGGACATCTACCTGTTTTTACTGGGATGGTAGAATTGGCTGGAATTACATTTACTGGTGAACCAGCCAAGAATAAGAAACAAGCTGAGAAAAATGCAGCAATGGTGGCTTGGTCATCTCTTAAACAATTGGCAAAAGAAACTGCAAGCTCTTCAAATGAACCAGAGATCAATGATGAACTTGAACAGATCACAATAGCACGGGCTTTACTGAACTACCGCCAGAAGGAAAAAATGGCAGTGTCAAATCCAAATGCTTTAATGCCGTTCCAAAAGAAATTTCATATTCAACATCCCAGGGCATCCAGTCCACAACCTCTACCTGCAACTACATCAAAGATCCTTCCCTTAATTTGCCTAAAGACAGCACCTCGAAATAAGCCCTCATTGGCAACCGCAAACGAAGGACCTCGAAGCAGGCATCCTTTAACAGCTAGTGACAGTTCCCTGTTACCACCACAATCTTCTGCACTAGAAAGCCGAGTTGCCCGTCCCATAAAGTTCCCTGCAGCAGGAGCAGCACCATATGTTCCCCTTCGACATATGAGATCATGCCATGGAATTGCTCCTGCAGTGAATATACGGTCAGTAGTACCTGTCTATGCTGCACCACCTCTTCCACCACCCGGCACAGTGCCCCAGCAGGTTATAAGGGCTTCTACTGTACAACTTGCTCCTCCGGTCACTATTAGGCAAGCTATTCCAGTATATGCTGCTCCGCCAATAAGTAAAGATGAACCTGCTCCTGTTCAGAAGCAAAACCCCCTTACCCCGGTTAAAGAAGAAAAATTGCCACCTAAAGTTAAAGAGACGGATGCCAAGTTTGAGAATGCATTAGCAGAATCACGGACAGCACAAATCTTGGAGCAGCTGAAAATTTGA 1218 0.4844 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPLYTTYRSGLGHLPVFTGMVELAGITFTGEPAKNKKQAEKNAAMVAWSSLKQLAKETASSSNEPEINDELEQITIARALLNYRQKEKMAVSNPNALMPFQKKFHIQHPRASSPQPLPATTSKILPLICLKTAPRNKPSLATANEGPRSRHPLTASDSSLLPPQSSALESRVARPIKFPAAGAAPYVPLRHMRSCHGIAPAVNIRSVVPVYAAPPLPPPGTVPQQVIRASTVQLAPPVTIRQAIPVYAAPPISKDEPAPVQKQNPLTPVKEEKLPPKVKETDAKFENALAESRTAQILEQLKI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01857 405 PANTHER - 1 353 - -
Arst8g01857 405 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Arst8g01857 405 Gene3D - 84 155 - -
Arst8g01857 405 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Arst8g01857 405 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Arst8g01857 405 MobiDBLite consensus disorder prediction 240 268 - -
Arst8g01857 405 FunFam Double-stranded RNA-binding protein 2 84 155 - -
Arst8g01857 405 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Arst8g01857 405 FunFam Double-stranded RNA-binding protein 2 1 70 - -
Arst8g01857 405 Gene3D - 2 83 - -
Arst8g01857 405 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Arst8g01857 405 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Arst8g01857 405 SMART DRBM_3 2 69 IPR014720 -
Arst8g01857 405 SMART DRBM_3 88 154 IPR014720 -
Arst8g01857 405 SUPERFAMILY dsRNA-binding domain-like 88 158 - -
Arst8g01857 405 MobiDBLite consensus disorder prediction 353 381 - -
Arst8g01857 405 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01857 Arst-Chr8 26887355 26891396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01857 - - gmx:100815739 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01857 8 26887355 26891396 Arst8g01857 8 26887355 26891396 ECH
Arst8g01857 8 26887355 26891396 Arst3g00208 3 1478569 1481571 PCT